Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00454 ATGGCAACCGCTACCGCCACCGCCGCTGCCACCTCATCCCTCATCGGAACTCGTCTCCGCGGAGTTCAATCCAATTCCGGCCGAATCCAAGCTCGATTCGGCTTCGGAATCGGAAAAAAGAAAGCAGCACCAAAGAAAGCATCACGATCGAGTCCAACCACCGATCGTCCGTTATGGTATCCAGGTGCAAAGTCACCGGAGTGGCTTGACGGAAGTTTGATCGGAGATTACGGATTCGATCCATTCGGTTTGGGGAAACCAGCTGAGTATTTGCAATTCGATCTTGATTCACTTGATCAGAATTTAGCGAAGAATCTTGCCGGAGATGTTATCGGAACTAGAACGGAGTTCTCGGACGTGAAATCGACGCCGTTTCAGCCTTACACTGAAGTTTTTGGACTTCAGAGGTTTAGAGAATGTGAATTGATTCATGGAAGATGGGCTATGCTTGCTACTCTTGGTGCTCTTACTGTTGAATGGCTTACTGGTGTTACTTGGCAAGATGCTGGAAAGGTGGAGCTAGTAGAAGGGTCAACATATCTTGGACAACCACTTCCATTCTCCATCACAACACTAATCTGGATTGAAGTACTAGTAATTGGATACATTGAATTCCAGAGGAATGCAGAGCTTGACTCAGAAAAGAGACTATACCCAGGTGGAAAATTCTTTGACCCACTTGGTTTAGCAGCTGACCCAGAAAAGAAAGCAACACTACAATTGGCAGAAATCAAACATGCTCGTCTTGCTATGGTTGCATTCCTTGGTTTTGCTGTTCAAGCTGCTGCTACTGGTAAAGGTCCTCTTAACAATTGGGCTACACATTTGAGTGATCCTCTTCACACTACCATCATTGATACCTTTTCTTCCTCTTAA 876 0.4578 MATATATAAATSSLIGTRLRGVQSNSGRIQARFGFGIGKKKAAPKKASRSSPTTDRPLWYPGAKSPEWLDGSLIGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00454 291 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 287 IPR001344 GO:0009765|GO:0016020
Trre8g00454 291 Pfam Chlorophyll A-B binding protein 66 261 IPR022796 -
Trre8g00454 291 FunFam Chlorophyll a-b binding protein, chloroplastic 104 290 - -
Trre8g00454 291 Gene3D Chlorophyll a/b binding protein domain 59 291 - -
Trre8g00454 291 MobiDBLite consensus disorder prediction 40 59 - -
Trre8g00454 291 SUPERFAMILY Chlorophyll a-b binding protein 49 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00454 Trre-Chr8 3438579 3440285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00454 14 291 Chloroplast and Mitochondria Gene Families AT3G08940 86.022 3.43e-177 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00454 K08915 - cpap:110807734 502.286