Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00423 ATGCCTTCATCTTCCACAACCATAGTTTCAAAATGCACAATCTACCCAAACCAAAAATCATCAATAAAACCCTTAAAACTCTCTGTTTCTGATCTTCCAATGCTTTCATGTCACTATATCCAAAAAGGAATTTTACTTTCTACACCTCCTTATTCCTTTGAAGACCTTATTCAAACCCTCAAAACCTCTCTCTCCATCACTCTCTCTCACTTCCCTCCTCTTGCCGGCCGACTCACCACCGACTCCGACGGTTACATTTACATAACATCCAACGACGCTGGCGTCGATTTCATTCACTCCAAAGCCAAACACTTAACCATAAACACCGTCCTTTCACCTTCTTTGATCGATGTTCATCCTTGTTTCAAAGAATTCTTCGCTTATGATATGCCGGTTTCTTACTCCGGTCACCAAAACCCTCTCGCTGCCGTTCAAGTAACCGAACTAGCCGACGGTGTTTTCATCGGTTGTACTGTTAATCATTCCGTAACCGACGGTACTTCTTTCTGGCACTTCTTTAACACGTTTGCCGCCGTCACTAAAGGCGGCGGTGGCGGCGCCGTCAAGATCACAAAATCTCCAGATTTCACAAGAAACACAATCTTTAACTCAACCGCCGTCCTCCCTATCCCCGACGGCGGTCCCACCGTCACTTTCGACGTCGATGAGCCTCTCCGTGAACGTGTCTTTCATTTCTCTCGTGAATCCATTCTCAAACTGAAACAGAAAGCAAACAGTAACGGTAACAGCAACGGTTTAACAGATCCAACGGAGGTAATAGCAAAACAAGCAAACGACAGTTGGAAAAACGTTAGCTCTAACGGCCACGTACACACAAACGGAACCGTTAAATCTAACGTGAGAAACGAGATCTCGTCGTTTCAATCGTTAAGTGCACAGTTATGGCGATCAATAACACGTGCGCGAAAATTAGATTCAACCAAAACGTCGACGTTTCGTATGGCTGTAAATTGTCGTCATAGATTAAACCCAAAAATGGAACCGTTTTATTTCGGTAACGCGATACAAAGCATCCCAACCGTTGCTTCAGTGAAAGATATTCTATCCAACGATCTAAAATACTGCGCTGGATTACTTCATCAAAACGTCGTCGCACATGATGATGCTACGGTGCGCCGCGGAGTAGAGGATTGGGAAAATAATCCAAGGTTATTTCCACTTGGGAATTTTGACGGTGCTATGATAACAATGGGTAGTTCACCACGTTTTCCTATGTACGATAATGATTTTGGTTGGGGTATACCTTTGGCTATAAGAAGTGGAAAAGCTAATAAATTTGATGGGAAAATTTCAGCTTTTCCTGGTAGAGAAGGAAATGGAAGTGTTGATCTTGAAGTTGTTTTGAAACCTGAAACTATGGTTGGACTTGAAAATGACATTGATTTTATGCAGTATGTTACGGATGTAGTGTGA 1434 0.4296 MPSSSTTIVSKCTIYPNQKSSIKPLKLSVSDLPMLSCHYIQKGILLSTPPYSFEDLIQTLKTSLSITLSHFPPLAGRLTTDSDGYIYITSNDAGVDFIHSKAKHLTINTVLSPSLIDVHPCFKEFFAYDMPVSYSGHQNPLAAVQVTELADGVFIGCTVNHSVTDGTSFWHFFNTFAAVTKGGGGGAVKITKSPDFTRNTIFNSTAVLPIPDGGPTVTFDVDEPLRERVFHFSRESILKLKQKANSNGNSNGLTDPTEVIAKQANDSWKNVSSNGHVHTNGTVKSNVRNEISSFQSLSAQLWRSITRARKLDSTKTSTFRMAVNCRHRLNPKMEPFYFGNAIQSIPTVASVKDILSNDLKYCAGLLHQNVVAHDDATVRRGVEDWENNPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGIPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLKPETMVGLENDIDFMQYVTDVV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00423 477 Pfam Transferase family 6 469 - -
Trre8g00423 477 Gene3D - 223 469 IPR023213 -
Trre8g00423 477 Gene3D - 6 208 IPR023213 -
Trre8g00423 477 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00423 Trre-Chr8 3123969 3125402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00423 58 465 Monolignol Biosynthesis Gene Families AT5G48930 26.559 7.31e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00423 - - cam:101493121 806.594