Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00414 ATGGGAAGAGAAATCATTCGTGATAAATCACCAAAGGAACTTGAGAAGCGTAGCAGGTTATGGTTTCATGAGGATGTTTTGGATGTATTGTCGGAACAAAATGGAACACAAGCTGTTGAGGGACTGGTTTTGAAGTTGACACCTAATGTAAAATGTTTTAGTACCAAAGCATTTAAGAACATGAAGAAACTTAGATTGCTTCAACTTTCTGGTGTACACCTTGATGGAGATTTTAAATATCTTTCTAGAAGATTGAGATGGCTATGTTGGAAAGAATTTCCTTTAACATGCATGCCTTCAAACTTTGATCAAAGAAACTTAGTTTCCATCGAGTTAGAAAACAGCAATATCAAGTTTGTGTGGAAAGAGATGCAGAGGATGGAGAATCTTAAAATCCTCAATCTTAGTCATTCTCATTATCTAACACAGACCCCAGACTTTTCCAAAATGCCTTATCTTGAAAAGCTAATACTCAAAGATTGTCCAAGGCTGACTGAGGTTTCCCATACCATTGGACATCTTCATAAAGTTCTTCTGATAAATTTGAAAGACTGTATTAGCCTTTCTAACCTTCCAAGAACCATCTATACATTGAAATCTCTGAAAAATCTTATTCTATCTGGATGTTTAATGATTGAGAAGTTGGAAGAGGACATAGAACAGATGGAATCTTTAACCACTCTGATTGCTGATAACACTGCTATAACAAAAGTTCCCTTTTCACTAGCAAGGTCGAAAAGCATTGGATATATTTCTTTGAGTGGCTATAAAGGATCTGCACATGAAGTATTTCCTTCTATCATTCAGTCTTGGTTCTCACCAACAAATAAATTGTCATCCTTAGTTCAAACGCCTGCTGGCATGTGTTCTCTTGTTTCTTTAGATGCATCAAAAATAAGTTCCCACAGCCTATCATCTATTTCCGAGGTCCTTCCAAAGGTTCTAAGTCTTTTGGTAGAATGCGGCTCAGAAATTCAACTTTCTCGAGATGAAATTTTAAATGCTTTAGGTGCAGCTAATTCTAAGGAATTGGAATCAATTGCAACTACATCACAAGTAGCAATTGTGAAGACTTCTACATTAATTGAATGTTGTGGTCAAGTTCACATTTCAGCAACAAAACAATCCCTGGAGTCTCTTCTGTTTAGAATGGGAATGAATTGCCAAGCCGCCGATGTTCTGAAAGAAAGCATCTTACAGAATATGACTGTCAATGCATTGGATGGTTGCTTGATCCCTGGTGATAATTATCCAAATTGGTTAACCTTCAATTCCGAAGGTTCTTCTGTTATTTTTACAGTCCCTCAAGTGAAAGGGCATAACTTGAAGACAATGATGTGCTTCGTCTATTCCTCAAGCCCAGATAACTTAACATCAGATGGACTTAAAAATGTATTGGTGATTAATCACACAAAGACCACCATTCAGCTCTACAAGAGAGAGGCGTTTGCCTCTTTGGAAAACGAAGACTGGCAGAAAGTATTATCAAATATAGAACCTGGTGACAAAGTGGAGATTGTTGTTGTTTTTGGGAACCATTTCATTGTGTTGAAGACAGCAGTTTATCTCATATATGATGAAGCAATCAACGAAAAATTGGAGCAATGTCATGCACCCGATGAGAGGTCCACTCTTCAATGTATTGGAGCAATTATTGGTAATGAAGATGAAACTGGCACTGCCAAGAGGTCCACTCTTCAAGTAGATCCCGCACATGATTTTAAACAAAAACAGAAAAGAAGAAAACTTGACTGA 1755 0.3721 MGREIIRDKSPKELEKRSRLWFHEDVLDVLSEQNGTQAVEGLVLKLTPNVKCFSTKAFKNMKKLRLLQLSGVHLDGDFKYLSRRLRWLCWKEFPLTCMPSNFDQRNLVSIELENSNIKFVWKEMQRMENLKILNLSHSHYLTQTPDFSKMPYLEKLILKDCPRLTEVSHTIGHLHKVLLINLKDCISLSNLPRTIYTLKSLKNLILSGCLMIEKLEEDIEQMESLTTLIADNTAITKVPFSLARSKSIGYISLSGYKGSAHEVFPSIIQSWFSPTNKLSSLVQTPAGMCSLVSLDASKISSHSLSSISEVLPKVLSLLVECGSEIQLSRDEILNALGAANSKELESIATTSQVAIVKTSTLIECCGQVHISATKQSLESLLFRMGMNCQAADVLKESILQNMTVNALDGCLIPGDNYPNWLTFNSEGSSVIFTVPQVKGHNLKTMMCFVYSSSPDNLTSDGLKNVLVINHTKTTIQLYKREAFASLENEDWQKVLSNIEPGDKVEIVVVFGNHFIVLKTAVYLIYDEAINEKLEQCHAPDERSTLQCIGAIIGNEDETGTAKRSTLQVDPAHDFKQKQKRRKLD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00414 584 MobiDBLite consensus disorder prediction 559 584 - -
Trre8g00414 584 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 305 IPR044974 GO:0006952
Trre8g00414 584 SUPERFAMILY L domain-like 49 318 - -
Trre8g00414 584 Coils Coil 212 232 - -
Trre8g00414 584 Gene3D Ribonuclease Inhibitor 39 355 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00414 Trre-Chr8 2995688 2998223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00414 124 243 WRKY Transcription Factor Family AT4G12020 31.667 1.92e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00414 - - lja:Lj0g3v0160149.1 749.584