Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00404 ATGATGTCACTGCAACCATTTTTTGAGAATTCTGGTTTTGATATGGTTGCTGGAGAAGTGTCTTTCCATGTACCTCGTCCGACCACTGAGACAGGAGGAGTACTCCATCTCACCGGAACAGCAAGTCACGAGCAAGGATACTTGGAAGATTTTTTTAGCTGCCAAATGGAAACTAATTTATGTATCAAAGAGGAAGTTTTCTCGGATACACAGCATCTAGTCCATTCTATTCTTGATGGTTACAATGTCTGTATATTTGCCTATGGCCAGAGTGACAGGATCAAGAAAGACATACACTATGTCTGA 306 0.4118 MMSLQPFFENSGFDMVAGEVSFHVPRPTTETGGVLHLTGTASHEQGYLEDFFSCQMETNLCIKEEVFSDTQHLVHSILDGYNVCIFAYGQSDRIKKDIHYV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00404 101 Pfam Microtubule binding 59 90 IPR031852 GO:0008017
Trre8g00404 101 PANTHER KINESIN-LIKE PROTEIN KLP-3 63 93 IPR027640 GO:0003777|GO:0007018
Trre8g00404 101 Gene3D Kinesin motor domain 22 96 IPR036961 -
Trre8g00404 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 91 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00404 Trre-Chr8 2902911 2904422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00404 63 91 Calmodulin-binding Proteins AT5G65930 62.069 1.15e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00404 K10406 - sspl:121749071 55.8398