LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre8g00376	ATGAAGTTATTTCTTCTTTGCTTTCATTTTTTCTTCAGTTTCACATTTTCTCTCTCATCTGATGGTCTAGCACTTCTCTCTCTGAAATCTGCCGTTGATCAATCCGGCAATGGTGCTTTCTCCGATTGGAACGGGGGAGATTCTTACCCCTGTGGTTGGTCGGGAATCTCCTGTGCGAATATCTCCGGTGTACCGGAGCCACGTGTTGTTGGAATCGCACTTGCCGGAAAATCGCTCCGTGGTTATATTCCGTCGGAGCTCGGTACACTTCGGTATCTTCGTCGTCTTAATCTTCATGATAATGAATTCTATGGTGTAGTTCCGGTTCAGCTGTTTAATGCTACTGCATTACATAGTATTTTTCTTCACCGGAATAATCTCTCCGGTCCATTTCCGGCTTCCATTTGTACTGTTCCACGTCTTCAGAATCTTGACCTCTCTGACAATTCGTTCTCCGGTAGCATTCCTAATGATGTCAAGAAATGTACGCAGATTCAAAGACTTATTCTAGCAAGGAACAAATTCTCCGGCGAAATTCCGGCCGGTGTGTGGTCGGAACTTGATAATCTCATCCAACTTGACCTCTCTGCCAACGATTTCAAAGGTCCAATCCCAGAAGATATTGGTGAACTTCATACCCTCTCCGGTACACTGAACCTCTCGTTCAACCACCTCTCCGGTAGGATTCCGAACTCACTCGGGAAATTGTCGGCCACCGTGAACTTTGATCTCCGAAACAACGACCTAATTGGCAAGATTCCCCAAACAGGAACATTCTCAAACCAGGGTCCAACTGCATTCCTCGGTAACAAAAACTTGTGTGGACTTCCACTTAGAAAATCCTGCACAAGTTCAGATCGAGCGCCAGGTGGTTCGTCTTCTCACGAAGACGAATCTCGTAACCGCTCAAAAGGGTTGAGCCCTGGTTTGATTATTTTGATCTCAGCAGCCGATGTTGCTGGGGTCGCTCTTGTTGGACTTGTGATTGTGTATGTTTATTGGAAGAAAAAGGATGATGGCAATGTGTGTAGTTGCATTGGGAAGAGAAGATTTGGTGATGAGAATGAAAAAGAGAATCCTTGTACTTTACTTCCATGTATGAATAATTTGAAGAATGATGAAGACGGCGATGAGGGTGAAGTTGAGGTAGATGGAGGGGGAAAAGGGGAAGGCGAATTGGTGACAATTGATAAAGGTTTTAGAATTGAGCTTGATGAGCTTTTGAAGGCATCAGCATATGTGTTAGGGAAGAGTGCATTGGGGATTGTGTATAAGGTGGTGCTTGGAAATGGAATGCCAGTGGCTGTAAGGAGATTAGGGGAGGGTGGAGAAGAGAGGTATAAGGAGTTTGTGGCTGAGGTGCAAACCATTGGGAAGGTGAAGCATCCTAATATTGTTAGGTTGAGAGCTTATTATTGGGCTCATGATGAAAAGCTTCTTATAAGTGATTTTATCTCCAATGGTAATTTGGGCAATGCACTTCGAGGGAGAAATGGCCAACCATCTTCTAACCTTTCATGGTCAACAAGGTTAAGAATTGCCAAAGGAATAGCAAGAGGTTTATCCTATCTTCATGAATTTAGTCCAAGAAAATTTGTCCATGGTGACATAAAACCAACAAACATCCTACTTGACAATGACTTACAACCTTACATTTCCGATTTTGGTCTTAACCGACTAATCAGCATCACAGGCAACAACCCTTCAACTGGTGGATTCATGGGTGGCGCTTTACCTTATTACGTGATGAAATCGTCACACAAAGAAAACCGAACAAATAATAGGTTGTCATTGGATAATAGTCGTGGTTGTAACAATTACAAAGCCCCCGAGGCTCGTGTACCTGGTTGTAGACCAACACAAAAATGGGATGTATATTCATTAGGTGTTGTTTTACTTGAATTGTTAACGGGGAAATCTACAGAAACTTCTCCCACATCGGCATCATCATCGGCTTCAGTTGAAGTTTCCGATTTGGTAAGGTGGGTTAGAAATGGTTTTGATCAAGAAAGTCCATTATCCGAAATGGTCGATCCTTCATTGTTACAAGAAGTTCGTGCTAAGAAAGAGGTGTTGTCTGTGTTTCATGTTGCACTTGCTTGTACCGAAGGTGATCCTGAGGTTAGGCCTAGAATGAAAACTGTTTCTGAAAATCTCGAAAAAATTGGAAGGTAG	2175	0.4308	MKLFLLCFHFFFSFTFSLSSDGLALLSLKSAVDQSGNGAFSDWNGGDSYPCGWSGISCANISGVPEPRVVGIALAGKSLRGYIPSELGTLRYLRRLNLHDNEFYGVVPVQLFNATALHSIFLHRNNLSGPFPASICTVPRLQNLDLSDNSFSGSIPNDVKKCTQIQRLILARNKFSGEIPAGVWSELDNLIQLDLSANDFKGPIPEDIGELHTLSGTLNLSFNHLSGRIPNSLGKLSATVNFDLRNNDLIGKIPQTGTFSNQGPTAFLGNKNLCGLPLRKSCTSSDRAPGGSSSHEDESRNRSKGLSPGLIILISAADVAGVALVGLVIVYVYWKKKDDGNVCSCIGKRRFGDENEKENPCTLLPCMNNLKNDEDGDEGEVEVDGGGKGEGELVTIDKGFRIELDELLKASAYVLGKSALGIVYKVVLGNGMPVAVRRLGEGGEERYKEFVAEVQTIGKVKHPNIVRLRAYYWAHDEKLLISDFISNGNLGNALRGRNGQPSSNLSWSTRLRIAKGIARGLSYLHEFSPRKFVHGDIKPTNILLDNDLQPYISDFGLNRLISITGNNPSTGGFMGGALPYYVMKSSHKENRTNNRLSLDNSRGCNNYKAPEARVPGCRPTQKWDVYSLGVVLLELLTGKSTETSPTSASSSASVEVSDLVRWVRNGFDQESPLSEMVDPSLLQEVRAKKEVLSVFHVALACTEGDPEVRPRMKTVSENLEKIGR	724

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre8g00376	724	Gene3D	Phosphorylase Kinase; domain 1	398	484	-	-
	Trre8g00376	724	FunFam	Os07g0541700 protein	493	575	-	-
	Trre8g00376	724	Gene3D	Transferase(Phosphotransferase) domain 1	485	723	-	-
	Trre8g00376	724	SUPERFAMILY	L domain-like	19	279	-	-
	Trre8g00376	724	Gene3D	Ribonuclease Inhibitor	189	280	IPR032675	-
	Trre8g00376	724	Pfam	Leucine Rich Repeat	217	236	IPR001611	GO:0005515
	Trre8g00376	724	FunFam	Leucine-rich repeat receptor-like protein kinase	18	181	-	-
	Trre8g00376	724	SUPERFAMILY	Protein kinase-like (PK-like)	414	719	IPR011009	-
	Trre8g00376	724	Gene3D	Ribonuclease Inhibitor	17	188	IPR032675	-
	Trre8g00376	724	SMART	serkin_6	409	722	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre8g00376	724	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	167	722	IPR046959	-
	Trre8g00376	724	Pfam	Leucine rich repeat	92	150	IPR001611	GO:0005515
	Trre8g00376	724	Pfam	Leucine rich repeat N-terminal domain	19	58	IPR013210	-
	Trre8g00376	724	FunFam	Leucine-rich repeat receptor-like protein kinase	392	484	-	-
	Trre8g00376	724	Pfam	Protein kinase domain	414	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre8g00376	724	ProSiteProfiles	Protein kinase domain profile.	409	722	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre8g00376	724	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	532	544	IPR008271	GO:0004672\|GO:0006468
	Trre8g00376	724	FunFam	Leucine-rich repeat receptor-like protein kinase	189	284	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre8g00376	Trre-Chr8	2679403	2683082	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre8g00376	13	722	Receptor kinase-like Gene Family	AT1G67510	66.066	0.0	928

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Trre8g00376		Pkinase	2.7e-31	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre8g00376	-		-	gmx:100787556	1004.97