Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00375 ATGGCATATTCGTCTTCTGGAGCTTCTCAAATAACATACGCTAGACAATACAGGCATTCTGGAAGTAATGGAATTGTTGCTAGAGCATCTAACTTGAAAATGCGGCCATTATGGGATTCTGGTATAAATCATAGAATTTCAAAGCACCAGTTAAAATTGTGGGATATTACAGGAGTTAAGAAGAAAGAAATGGCCAATAAAATTGTCACAAAGGGTGTATCAGAAAAGGCAATCTCAAAAAATGCTCCCCAACCAAAGTATGATGTTTTTATATGGAGAGATACTTTGAAAAAATCTGCTAATTTATCAGGAATTACATCATCAAATTTTCGGAATGATGTCGAGCTGCTTGAAGAAATCATCAATCTTGTGTTGATGAGATTAAAATCAAGGGGAGACCTTAGAAAACACAGTCGGTTATGGGATTCTGATGAAATTTGTGATGTATTGAAAAACGACAAGGGTACTGAGGCTATTAGAAGCATAAGTGCAGACTTGTCATCAATTAGGAAACTGAAGTTGAGCCCTCGTGTATTTGCTAATATGACCAACCTGCAGTTTTTGGAATTTCGTGGTGAATACGACGAATACTGTTTGGATCTTTTTCCTCAAGGGCTTCAATCTTTTCCAACTAATCTAAGATATCTTCATTGGATGCATTACCCTCTAAAATCATTCCCAGAGAATGTTTCCACAGAGAATCTTGTTATATTGGATTTGTCATATAGTCTAGTGGAAAAGCTTTGGTGTGGAGTGCAGAGTCTGGTTAATTTAAAAGAAGTTATACTCTATAGATCCAAACTACTAAAGGAGCTACCAGACTTTTCAAAAGCTACAAATCTTGAAGTATTGGATATTAGTCATTGCCATGATTTGAAAAGCGTCCATCCATCTATTTTCTCTCTTGGCAAGCTTGTCAAATTGAATCTACACTTTTGTTCTTCCCTTACCAAATTCATAAGTGATACTCGTTTAAGCTCCCTCCAATATCTCAACCTTGGAAATTGCAAAAAACTAAGGACATTCTCGGTGACAACAACTAGTTTAATAGAACTAGATCTAACCGGCATTCGTATCAATGCACTGCCATCATCTTTTGGATGTCTAAGCAAGCTAGAAACGCTGTCTTTAGGAGATAGTGAAATTGAGAGTATACCTTCAAGCATAAAAAATCTTACAAAACTAAGAAAACTAGACATAAGACTTTGCTCTAGGATTTTGTTTCTACCCGAGCTTCCTTCATCACTTGAATCTCTAATTGCTGAAGGTGGATCACTGAATACTGTATTCTTCCCTTCAACAGCTGCTGAACAATTCAAGGAAAACAAGAAAAGGGTTGAGTTCTGGAATTGCTTGAACTTGCATATACAATCTCTCGTAGATATTGAGATTAATGCTGAAATCAATATAATGAAGTTTGCATATCAACATTTATCCACACTGGAACATGATGATTATGTTGAAAGCTATGTTGATTATAAATATAACTTTGCTTCATATCAAGCAATGTATGTGTATCCTGGAAGTAGTGTTCCATTGTGGTTCGAGTACAAGACAACAGAGAATGAGATGATTGTTGATCTCTCTTCTCATCACTCCCCTTTGTTGGGCTTTGTTTTTTGCTTCATCCTTGCTGAGGACTTTCAATGGTGTCATCGAATTGAAATGAAAATCACTGCAATTGATGCTGATGAGAGTGATGGTGAGAAGGATGATGTCCATATCTACATGTGCAGGTCATCTTTCAATATTGAATCAGATCACGTGTATATGATATACGACAAACCATCTTCTCAGTACCTAACTAGCATAGCAAAAAGTCATGAAAGATTTAAAATCAAGGTTACAGCAAGGACAGTATTTGAACTTGGAAATAGACCAGTGGTGGGGTTAAAAGGGTTTGGGAGAAATGGCCAACCATCTTCTAAACTTTCATGGTCAACAAGCATCACATGCAACAACCCTTCAACTGGTGGATTCATGGGTGGCGCTTTACCTTATTACGTGATGAAATCGTCACACAAAGAAAACCGAACAAATAATAGGTTGTCATTAGATAATGGTCGTGGTAGTAACAATTACAAAGCCCCCGAGGCTCGTGTACCTGGTTGTAGACCAACACAAAAATGGGATGTTTATTCATTAGGTGTTGTTTTACTTGAATTGTTAACCGGGAAATCTACAGAATCTTCTCCCACATCGGCATCATCATCGGCATCATCATCGGCTTCTGTTGAAGTTTCCGATTAG 2250 0.372 MAYSSSGASQITYARQYRHSGSNGIVARASNLKMRPLWDSGINHRISKHQLKLWDITGVKKKEMANKIVTKGVSEKAISKNAPQPKYDVFIWRDTLKKSANLSGITSSNFRNDVELLEEIINLVLMRLKSRGDLRKHSRLWDSDEICDVLKNDKGTEAIRSISADLSSIRKLKLSPRVFANMTNLQFLEFRGEYDEYCLDLFPQGLQSFPTNLRYLHWMHYPLKSFPENVSTENLVILDLSYSLVEKLWCGVQSLVNLKEVILYRSKLLKELPDFSKATNLEVLDISHCHDLKSVHPSIFSLGKLVKLNLHFCSSLTKFISDTRLSSLQYLNLGNCKKLRTFSVTTTSLIELDLTGIRINALPSSFGCLSKLETLSLGDSEIESIPSSIKNLTKLRKLDIRLCSRILFLPELPSSLESLIAEGGSLNTVFFPSTAAEQFKENKKRVEFWNCLNLHIQSLVDIEINAEINIMKFAYQHLSTLEHDDYVESYVDYKYNFASYQAMYVYPGSSVPLWFEYKTTENEMIVDLSSHHSPLLGFVFCFILAEDFQWCHRIEMKITAIDADESDGEKDDVHIYMCRSSFNIESDHVYMIYDKPSSQYLTSIAKSHERFKIKVTARTVFELGNRPVVGLKGFGRNGQPSSKLSWSTSITCNNPSTGGFMGGALPYYVMKSSHKENRTNNRLSLDNGRGSNNYKAPEARVPGCRPTQKWDVYSLGVVLLELLTGKSTESSPTSASSSASSSASVEVSD 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00375 749 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 324 437 IPR044974 GO:0006952
Trre8g00375 749 Pfam C-JID domain 506 593 IPR045344 -
Trre8g00375 749 SUPERFAMILY Protein kinase-like (PK-like) 686 728 IPR011009 -
Trre8g00375 749 MobiDBLite consensus disorder prediction 678 701 - -
Trre8g00375 749 MobiDBLite consensus disorder prediction 726 749 - -
Trre8g00375 749 SUPERFAMILY L domain-like 163 481 - -
Trre8g00375 749 Gene3D Transferase(Phosphotransferase) domain 1 637 746 - -
Trre8g00375 749 Gene3D Ribonuclease Inhibitor 149 345 IPR032675 -
Trre8g00375 749 Gene3D Ribonuclease Inhibitor 346 482 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00375 Trre-Chr8 2666813 2677691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00375 125 419 WRKY Transcription Factor Family AT4G12020 38.033 1.03e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00375 - - tpra:123920755 744.962