Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00374 ATGAGACCATTATGGTACTCTGGTATAAATCATAAAATTTCAAAGCAGCAGTTAAATTTGTGGGCTATTGCAGGAGTTAAGAAGAAAAATTTGGTCAATAAAATTGTCGCAAAGGGTGTAGCAGAAAAGGCAATGACAAACAATACTCCTCATTTAAAGTATGATGTCTTCATTATAATACCTGTTTTCTACGGGGTAGATCCAACAAATGTACGGCACCAAAAGAAGAGTTATGAAAATGCATTTGCTGAACTTGAAAAGAAGTATAATTTGTCCGAAGTGCAGATATTGAGACGTGCGTTGAAAATATCTGCTAATTTGTCAGGAATTACATCATCAAGTTTTCAGAATGATGCTGATCTGCTTGAAGAAATCACCAATGTTGTGCTGATGAGATTGAAAATGGGTCGGGAGGTTGTTCGCCAAGAATCTAGTGAAGACCCTAGAATACGCAGTCGATTATGGGATCCTGATGAAATCTGCGATGTATTGACAAATGACAAGGGTACAGAGGCTATTAGAAGCATATTTGCAGACTTGCCAGATATTAAGAAGCTGAAGTTAAGCCCTCATTCGTTACCTGAGAAATTTTCTGCAGAGAATCTTGTTATATTGGACTTGTCAGGGGGCCAAGTCGAAAAGCTTTGGTGCGGAGTGCAGGGTCTAGTTAATTTGAAACAAGTTACACTCACTAGTTCACCTTTCCTGAAGGAGTTACCAGACTTTTCAAAAGCTACAAATCTCAAGGTATTGAATGCCGCACTTTGTGGTCGCTTGAAAAGTGTCCATCCATCTGTTTTCTCTCTTGACAATCTTGTGCGATTGGACCTAAGTATTTGCCCTTCTCTCACAACATTTACAAGCAATTCCCATTCAAGCTCCCTCCATTATCTCAGCCTTGGATTATGTAGAAATCTTCGTAAATTCTCAGTGACTTTGGAGAATATAATCGAATTAGATCTAACGGCCGTTCCCATCAATGCACTGCCAGCATCTTTTGGATTTCAAAGCAGACTAGAAACCCTGGTTTTAAAACTCAGTGAAATTGAGAGCATACCTTCAAGCATCGAGAATCTTACAAGACTAAAAAAACTAGACATACAACTTTGCAAAAAGATTCTGTCTCTACCCGAGCTTCCTTCATCACTTGAAACTCTACTTGTTGAATGTAAATCACTGAAGACTGTATTGTTCCCTTCAACAGCTGCTGAACAATTCAAGGAAAACAAGAAAAGGGTCGAGTTCTGGAATTGCTTGAACCTGGATGAACGTTCTCTCACAAATATTGGGTTGAATTTTCAAATCAATTTGATGAAGTTTACATATCAACATTTATCGACACTGGAACACAATTATGTTGAAAGTTATGTTGATGACAAAGATAACTTTGCTAGTTATCAAAGTTATGTTGAATACAAATATAACTTTGCTGATTATCAAGCCGTGTATGTGTATCCTGGAAGTAGTGTTCCAGAGTGGTTCAAGTACAAGACAACAAAGGATGACATGATTGTTGATCTCTCTCCACCTCATGTATCCCCTTTGCTTGGCTTTGTTTTTTGCTTCATCCTTGCTGAGGATTCCGAATATTCTGAGCAATTTGAATTGAACATCACTACAATTGATGGTGAAAAGGATGGTGTCAATATCAACATGTATAGGACACGTTTCTATATTCAGTCAGATCATGTTTGCATGATATACCACCAACCATGTTCTCACTACCTAACCAACATAGCCAAAAATCAGACAATGTTTAAAATCAAGGTCACAGCAAGGACACAAACCAATGCATATAGAGAAAAACCAGAGGTGGAGCTAAAAGGGTTTGGCATCAGCCCCGTATACAACTCAACATATCACAATCTCATTAACCAAATGAAATTGTTTGATTATATTAACAAATGGAATAGGACTATGCTTAGTATCATCCTGTGTATATCCTTCCTGCAGCTGAAGATGAAGAAGTTGATTTAG 1977 0.3778 MRPLWYSGINHKISKQQLNLWAIAGVKKKNLVNKIVAKGVAEKAMTNNTPHLKYDVFIIIPVFYGVDPTNVRHQKKSYENAFAELEKKYNLSEVQILRRALKISANLSGITSSSFQNDADLLEEITNVVLMRLKMGREVVRQESSEDPRIRSRLWDPDEICDVLTNDKGTEAIRSIFADLPDIKKLKLSPHSLPEKFSAENLVILDLSGGQVEKLWCGVQGLVNLKQVTLTSSPFLKELPDFSKATNLKVLNAALCGRLKSVHPSVFSLDNLVRLDLSICPSLTTFTSNSHSSSLHYLSLGLCRNLRKFSVTLENIIELDLTAVPINALPASFGFQSRLETLVLKLSEIESIPSSIENLTRLKKLDIQLCKKILSLPELPSSLETLLVECKSLKTVLFPSTAAEQFKENKKRVEFWNCLNLDERSLTNIGLNFQINLMKFTYQHLSTLEHNYVESYVDDKDNFASYQSYVEYKYNFADYQAVYVYPGSSVPEWFKYKTTKDDMIVDLSPPHVSPLLGFVFCFILAEDSEYSEQFELNITTIDGEKDGVNINMYRTRFYIQSDHVCMIYHQPCSHYLTNIAKNQTMFKIKVTARTQTNAYREKPEVELKGFGISPVYNSTYHNLINQMKLFDYINKWNRTMLSIILCISFLQLKMKKLI 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00374 658 Coils Coil 75 95 - -
Trre8g00374 658 Gene3D Ribonuclease Inhibitor 314 455 IPR032675 -
Trre8g00374 658 Gene3D Ribonuclease Inhibitor 163 313 IPR032675 -
Trre8g00374 658 Pfam C-JID domain 485 617 IPR045344 -
Trre8g00374 658 Pfam TIR domain 57 132 IPR000157 GO:0007165
Trre8g00374 658 Gene3D - 40 139 IPR035897 -
Trre8g00374 658 SUPERFAMILY L domain-like 173 450 - -
Trre8g00374 658 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 134 399 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00374 Trre-Chr8 2659160 2664128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00374 136 382 WRKY Transcription Factor Family AT4G12020 32.013 1.25e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00374 - - tpra:123920755 653.284