LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre8g00373	ATGGTTCTAATTGATGAAAAGGGTGGAAAGATTCATGCTTCTATTAGAAAGCAGTTGATGTATATGTATGAATCCAAGCTCAAGGAGGGGCAGGGTGCTGGTATATCTGATTTTGGTCTAACCTTCACTAACATTGATGAAATATGTGCTCATACTCATGATTATGAGTACCTGGTTGATGTTATTGGTGTTTTGACTGGTATGTCTGCTGAGAGAGAGTATGTTAGGGATGGCAAGATAACTAAGATGATCATTGTTGAGCTTACTGATCATAGCGATAAGTGTGAATGTGCTTTGTTTGGTGATTACGTCGATGAGTTTAATAAGAAGATTGGGAAATCTGTTGTTGGGTTGCCAATTGTTGTCATTCAGTATGCCAAGATTAAAATTTTTAGAGACAAGGTATCCATCCAGAATGTGATTCACACTACCAGGATTTTTGTTAACCCAGATATCCCTGAGGTCGAAACTTTCAAGAATAGCATTGCTGTGCATGGTATTGAGTTGGATTCTGCTGTTCCATTGATTGGGGAGTCTGCTAAGCCTACACCCGATGAGGAGTTCCTTAGAATGCATCCGAAAAAAACACTGGATGAATTGGTTATTCCCAGGTTTAGGGTGAGGCTTGAGGTATCTGATGGGAAATCTACTCTGGTGTTTGTTTTGTTTGATTCTGACATGAGTTATATCATGGAGAAGTCATGTTCCTTTTTTGTTGTGCAATCTAAGACATTGTCCAATCCTATAGACTTGGGTTCTGGTACAGATACTTGTGGGAGTGATGCTGGTGATGATGATCTTCAGTCTTCACAGTTTGTTGATGATCTTATAATAACTCCACCAATGTCTCGTGTTGATGACGAGATAGACAGTGATGCTCCTGCTGTCTTTAAAAGGAATTTGTCTAAAGATTTTGATCGTGTGTCCAAGGGCCGGTCGAGTGTGCGCAGGAAGGTCAAGATTGAGAAGGATTAG	975	0.401	MVLIDEKGGKIHASIRKQLMYMYESKLKEGQGAGISDFGLTFTNIDEICAHTHDYEYLVDVIGVLTGMSAEREYVRDGKITKMIIVELTDHSDKCECALFGDYVDEFNKKIGKSVVGLPIVVIQYAKIKIFRDKVSIQNVIHTTRIFVNPDIPEVETFKNSIAVHGIELDSAVPLIGESAKPTPDEEFLRMHPKKTLDELVIPRFRVRLEVSDGKSTLVFVLFDSDMSYIMEKSCSFFVVQSKTLSNPIDLGSGTDTCGSDAGDDDLQSSQFVDDLIITPPMSRVDDEIDSDAPAVFKRNLSKDFDRVSKGRSSVRRKVKIEKD	324

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre8g00373	324	Gene3D	-	35	169	IPR012340	-
	Trre8g00373	324	CDD	RPA1_DBD_B_like	60	159	-	-
	Trre8g00373	324	Pfam	Domain of unknown function DUF223	1	56	IPR003871	-
	Trre8g00373	324	SUPERFAMILY	Nucleic acid-binding proteins	40	169	IPR012340	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre8g00373	Trre-Chr8	2647746	2649642	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre8g00373	58	159	Core DNA Replication Machinery Family	AT2G06510	29.245	7.66e-06	45.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre8g00373	-		-	tpra:123904946	328.946