Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00370 ATGGAGAACAATACTTGGCATAATGCTAAAGATTTGATTTTTGGCTTAAACCCATTTCAGAAATGTAGAAAAAATCAAAAGGGTAGTTTTATTTTGTTGGTTTTTTTACTTTTTGTATGTTTTAGTGTTGAACCTGTTTTAGGTCATTTATGGGATGGTGTTGTTGTAACACAATCTGATTTTCAATCTTTAAGGGCTATTAAAAATGAACTTATTGATTCAAAAGGGGTTTTGAAAAGCTGGAATGATAGTGGTTTAGGTGCTTGTTCAGGTAATTGGGTTGGAATCAAATGTTTGAAAGGTGAAGTTGTTGCAATTCAGCTTCCTTGGAAAAGTTTAGGTGGAAAAATTTCTGAGAAAATTGGTCAACTTCAATCTCTTAGAAAATTAAGTCTTCATGATAATTTACTTGTTGGTTCAATTCCTTTTTCTCTTGGTTTTCTTCCTAATCTTAGAGGTGTTTATCTTTTCAATAATAAGCTTTCAGGTTCTATTCCTCCTTCTATTGCTAATTGTCCAATGCTTCAATCTTTTGATGTTAGTCATAATTCACTTATTGGTAAAATTCCTTCTGGTTTAGCAAATTCAACTAGAATTTTCAGGATTAATTTGAGTTATAATTCACTTTCTGGTTCAATTCCTAGCTCATTCACTATGTCACATTCTTTAACTATTCTTTCTCTTGAATTCAATAATTTAACTGGTCCTATTCCAAGTGAATTAGGTAAACTTTCAAGGCTTAGAATTCTTGATCTTTCAAACAATGCTATCAATGGTAGTTTTCCTTTAAGCTTCTCTAATTTGTCTTCTCTTGTTTCATTGAATGTTGAAAACAATTATCTTGAAAACCATGTGCCTAATACTTTTGACAATTTACATAACCTTTCTTTGATTAACTTGAAGAACAATAAGTTTGATGGTAACATTCCATCAACACTTGGAAATATTTCGAGCATTAGTCAAATTGATTTGTCTCAGAACAAATTTGTTGGTGAAATTCCTGATTCTTTTACTAAACTAGCAAATCTAAGTTCATTCAATGTTTCACATAACAATCTATCTGGTCATGTTCCATCTCTACTTTCCAAAAGATTCAATGCTAGTTCATTTGAAGGGAACTTTGGTCTATGTGGTTTCATAAGTTCAAAACCATGTCCTTCACCATCACCACCACCTCATAATCTTCCAGCTCAATCTCCAGAAGAGCCTCCTTCAAAGAAACATCACAGGAAATTAAGCACAAAGGACATAATCCTTATAGTAGCTGGTGTTCTTTTGTTGATTTTGCTATTACTTTGCTGCTTTTTGCTTTGTTGTTTGGTCAGGAAAAGAGCTTCTTCAAGCAGAAAGAGTAGCAAAGCTGCTAAAGCTGCTGCTTCTGCTAGGAGTGTAGAGAAAGGCGGTGGTCCGGCTGGTGGTGATGTTGTATCAGGAGGTGAATCTGGTGGAAAACTAGTTCACTTTGATGGACCATTTGTGTTCACTGCTGATGATCTTTTGTGTGCTAGTGCTGAGATAATGGGAAAAAGTGCTTATGGAACAGCTTACAAGGCAACATTGGAAGATGGCAATCAAGTTGCTGTGAAGAGGTTGAGGGAGAAGACTACTAAAGGACAGAAGGAGTTTGAAGCTGAGGTTGCTTCACTTGGCAAAATCAGACATCCAAATCTGTTGGCTCTTAGAGCTTACTATCTTGGACCTAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGAGTAGAGGAAGCCTAGCATCATTCCTTCATGCTCGCGGACCTGAAATCATCGTCGAGTGGCCAACAAGGATGAAAATAGCAATTGGAATAACCAATGGTCTATCTTGCCTTCACAATCAAGAGAATATAGTACATGGCAATTTGACCTCAAGCAACATACAATTAGATGAGCAAACAATTCCTCACATCACAGATTTTGGTCTTTCAAGACTAATGACAACTTCTGCCAACACAAACATCATTGCTACAGCAGGAAGTCTTGGATACAATGCACCAGAGCTTTCAAAGACAAAGAAACCGACCACAAAAACCGATGTTTACAGCCTCGGTGTTATCCTTTTGGAACTCTTAACTGGTAAACCACCCGGGGAACCAACCAATGGAATGGACTTGCCTCAATGGGTTGCATCTATAGTTAAAGAAGAATGGACAAATGAAGTGTTTGATTTGGAACTCATGAGGGATGCACCAACCATCGGAGACGAACTTCTTAATACATTAAAATTGGCTTTACACTGTGTTGATCCTTCACCTTCTGCAAGGCCAGAAGTTAAGCAAGTTTTGCAGCAATTAGAGGAGATTAAGCCAGAATTGGTTGAAGTTGAAGTTGATGATGATGGAGCTAAGGTTCAAACAAATGAATAA 2379 0.3653 MENNTWHNAKDLIFGLNPFQKCRKNQKGSFILLVFLLFVCFSVEPVLGHLWDGVVVTQSDFQSLRAIKNELIDSKGVLKSWNDSGLGACSGNWVGIKCLKGEVVAIQLPWKSLGGKISEKIGQLQSLRKLSLHDNLLVGSIPFSLGFLPNLRGVYLFNNKLSGSIPPSIANCPMLQSFDVSHNSLIGKIPSGLANSTRIFRINLSYNSLSGSIPSSFTMSHSLTILSLEFNNLTGPIPSELGKLSRLRILDLSNNAINGSFPLSFSNLSSLVSLNVENNYLENHVPNTFDNLHNLSLINLKNNKFDGNIPSTLGNISSISQIDLSQNKFVGEIPDSFTKLANLSSFNVSHNNLSGHVPSLLSKRFNASSFEGNFGLCGFISSKPCPSPSPPPHNLPAQSPEEPPSKKHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLVRKRASSSRKSSKAAKAAASARSVEKGGGPAGGDVVSGGESGGKLVHFDGPFVFTADDLLCASAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFEAEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHARGPEIIVEWPTRMKIAIGITNGLSCLHNQENIVHGNLTSSNIQLDEQTIPHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPTTKTDVYSLGVILLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVKQVLQQLEEIKPELVEVEVDDDGAKVQTNE 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00370 792 SMART LRR_typ_2 148 172 IPR003591 -
Trre8g00370 792 SMART LRR_typ_2 124 145 IPR003591 -
Trre8g00370 792 SMART LRR_typ_2 340 363 IPR003591 -
Trre8g00370 792 SMART LRR_typ_2 244 267 IPR003591 -
Trre8g00370 792 SMART LRR_typ_2 268 291 IPR003591 -
Trre8g00370 792 SUPERFAMILY Protein kinase-like (PK-like) 505 775 IPR011009 -
Trre8g00370 792 Gene3D Transferase(Phosphotransferase) domain 1 579 788 - -
Trre8g00370 792 Gene3D Ribonuclease Inhibitor 56 198 IPR032675 -
Trre8g00370 792 Gene3D Phosphorylase Kinase; domain 1 507 578 - -
Trre8g00370 792 ProSiteProfiles Protein kinase domain profile. 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00370 792 MobiDBLite consensus disorder prediction 451 476 - -
Trre8g00370 792 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 263 385 - -
Trre8g00370 792 CDD STKc_IRAK 507 772 - -
Trre8g00370 792 Gene3D Ribonuclease Inhibitor 199 261 IPR032675 -
Trre8g00370 792 SUPERFAMILY L domain-like 112 364 - -
Trre8g00370 792 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Trre8g00370 792 MobiDBLite consensus disorder prediction 387 408 - -
Trre8g00370 792 FunFam Leucine-rich repeat receptor-like protein kinase 487 577 - -
Trre8g00370 792 FunFam Piriformospora indica-insensitive protein 2 166 262 - -
Trre8g00370 792 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 578 776 - -
Trre8g00370 792 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 196 772 - -
Trre8g00370 792 Gene3D Ribonuclease Inhibitor 262 386 IPR032675 -
Trre8g00370 792 Pfam Leucine rich repeat 245 305 IPR001611 GO:0005515
Trre8g00370 792 FunFam Leucine-rich repeat receptor-like kinase 59 165 - -
Trre8g00370 792 Pfam Protein tyrosine and serine/threonine kinase 505 769 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00370 Trre-Chr8 2628046 2631163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00370 49 774 Receptor kinase-like Gene Family AT3G51740 63.273 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre8g00370 PK_Tyr_Ser-Thr 4.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00370 - - aip:107625805 1128.62