Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00339 ATGAGAAACTCATTTAGGACTTTTCACAAACACTTCACATTCATTTCCTTTCATAAAACTCCTCACTCTTATGGTTTCCTAACTTCTTCTTCTCCTACACACCCCACTTTCTCTCAATTTCGCTCATCATACTCCTCATCTCCATCTTCTACATTTATGGAGGTATTCAAAGCAATTGCTAAGCAAGACCTTGCATCACAAGGAAATGTTGCTATCAGAGCTGATCACAAGAGTTATAGTTACAAGCAACTTATGTCGTCGGCACAGAAGATATCTAATCTCTTGTGTGGAAGTGATGTCAAAGCAGGAAATCTTGGTGGAGCACGGATAGGAATTGTAGCGAAACCCTCTGCTGAATTTGTTGCTGGAATACTTGGGACTTGGCTTAGTGGAGGTGTTGCTGTTCCACTTGCAGTCAGTTATCCAGAAGTAGAGCTCCTGTATGTGATGAATAATTCGGACACATCTGCAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAACATTGCCAATAAAACCTCTTCTCAATTTTTTCATCTTCCGCCTGTTGCTAATAAGTCGTTGGAGAAGAATAGAGATGAACATTCCAATAATGGGGAATTTGATTCAAACGGAATTTTCCTGGAGAATATTCAAAGATCAAGTGAAGATCCAGCACTCATTTTGTACACTAGCGGAACAACAGGTAAACCTAAGGGAGTTGTTCATACACATGGAAGCATCATTGCTCAGGTCCAATCCTTGGCAAAAGCGTGGGAGTATACATCTGCTGATCAGTTTTTGCATTGTCTACCACTGCATCATATCCATGAAAATGATATACATGTCCACGGGCTTTTCAACGGTTTACTGGCCCCTCTCTACGCTGGCTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTCAGGGGTGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGACGGATCTAAGGCTGATGATGCTGTAACTGTTTTCACTGGAGTTCCAACTATATATGCCCGATTAATTCAAGGTTACCATGCAATGGATCCAGAGCTACAAGCTGCTTCAGCATCTGCTGCAAGGAACTTGCGTCTAATGATGTGTGGGTCCTCGGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGTTTATTGGAACGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCGGGCACAGTTGGAAAACCATTGCCCGGTGTGCAGGTCCAGATTCTTGCAGATGGGGAGAATTGGAGTGAAGGAACTGGAGCTAGCGGTGAGCTTTGCGTTAAAAGCCCTTCACTGTTTAAAGAATATTGGAAACTTCCAGAGGTAATGAAGGAATCATTTACGGAAGAAGGATTCTTTAAGACCGGAGATGCCGTTACAACAGATAAAGATGGATATTACATCATTCTAGGACGTACTAATGCGGATATCATCAAGGCCGGTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTTATAATAGAGCATCCAGCTGTCTCAGAATGCTGTGTCCTGGGCTTACCACATAAAGAATATGGAGAAATTGTTGGTGCAATTATCGTGCCAGAGTCCGATGTTAAAAGAAATCGAGATGAAGAGTCAAAGCCTGCTCTTAGCCTTGAAGAATTATCCACCTGGGCCAAAGATAAACTTGCACCTTACAAGATACCAACTCGACTTATCGTGTGGGATTCACTCCCCCGCAATGCAATGGGGAAGGTAAGTAAAAAAGAGCTAAAGAAGATGCTAGCTTCAGAACAGTAA 1812 0.4249 MRNSFRTFHKHFTFISFHKTPHSYGFLTSSSPTHPTFSQFRSSYSSSPSSTFMEVFKAIAKQDLASQGNVAIRADHKSYSYKQLMSSAQKISNLLCGSDVKAGNLGGARIGIVAKPSAEFVAGILGTWLSGGVAVPLAVSYPEVELLYVMNNSDTSAILSTEDHSELMQNIANKTSSQFFHLPPVANKSLEKNRDEHSNNGEFDSNGIFLENIQRSSEDPALILYTSGTTGKPKGVVHTHGSIIAQVQSLAKAWEYTSADQFLHCLPLHHIHENDIHVHGLFNGLLAPLYAGSTVEFLPKFSVRGVWQRWRESYPTDGSKADDAVTVFTGVPTIYARLIQGYHAMDPELQAASASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVQILADGENWSEGTGASGELCVKSPSLFKEYWKLPEVMKESFTEEGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECCVLGLPHKEYGEIVGAIIVPESDVKRNRDEESKPALSLEELSTWAKDKLAPYKIPTRLIVWDSLPRNAMGKVSKKELKKMLASEQ 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00339 603 CDD MCS 70 597 - -
Trre8g00339 603 Gene3D - 491 603 IPR045851 -
Trre8g00339 603 Gene3D - 56 487 IPR042099 -
Trre8g00339 603 PANTHER ACYL-COA SYNTHETASE 51 599 - -
Trre8g00339 603 SUPERFAMILY Acetyl-CoA synthetase-like 43 601 - -
Trre8g00339 603 FunFam Acyl-CoA synthetase family member 3 61 487 - -
Trre8g00339 603 Pfam AMP-binding enzyme 67 493 IPR000873 -
Trre8g00339 603 ProSitePatterns Putative AMP-binding domain signature. 223 234 IPR020845 -
Trre8g00339 603 Pfam AMP-binding enzyme C-terminal domain 504 589 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00339 Trre-Chr8 2437118 2444146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00339 218 601 Monolignol Biosynthesis Gene Families AT4G19010 28.070 1.76e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00339 K18660 - gmx:100813324 936.021