Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00327 ATGGTGCCACCATTGATACTACCAAAATTGAGTCTTGTGATTCTTGTATTCTGCATTTTAATCTCTTTCGATCAACACAAACACAACAACAACAACACCATTAACACAAACAACAACACATTCAATTTCATCAACACCATTCCATTTCCATTACATTCTTTTTCTAGTGGTCCAGTTTCTTTATCTGCCACCACCAACAACCATTATTCAGATTCTAATTCTCAATCTCTTCTTGAATATCATTTTTACCGTAATTCTTGTCCGAATGCTGAACGCATTGTCCGTTCTATGGTTCATCGGCTTTACAAAACTAATCATACTTTGATTCCTGCTCTTATTCGTCTTGCTTTTCATGATTGCTTCATTCAGGGATGTGATGCTTCTATTTTGTTAGAAGATGATGATTACATTGATTCAGAGAAAGAGTCACCTCCCAATGGAAGTCTCAAAGGATTTGATGTAATAGAGACCATTAAATCCAAGCTTGAAAAAGCATGTCCTGGAGTTGTTTCTTGTGCTGATATTCTTGTGCTGGCTGCAAGGGACTCTGTTGCTCTGGTTGGTGGTCCATTCTATCCATTATATACAGGCAGGAGGGATGGTTCTAACTCTTTTGCTGACATTGCAACGGATGAGCTTCCTTCACCCTATGCTGATTTATCTCAAATGCTTTCATCTTTCAAATTAAGGGGATTTGATGAAAGAGAAATGGTCACTCTCTTAGGTGCTCACAACATTGGTGTAATCCATTGCAAATTCTTCGAAAACCGTCTTTATAACCTCAGCGGAACTAATAAACCTGACCCTTCTATAAATACTGAATTTCTAAATGTACTAAGATCAAGATGCAATGAAACTGATGCATTGTCAATTTCAGCATCAGGATATACATCACAGGCCTTATCTTCTTCCTTAGTTGAAGAGCAGCAAGAAATTACTATGGACTCTAAGAAATCTCTATCAGATTTCGGGATGTTATACTACCGCAACCTATTGCAAGGTAAAGGAATCCTCTATGCTGATCAGCAGCTAATGAAAGGTGAAAAAACAAAGTATTGGGTTCAAGAATATGCATATAATTCTACTTTGTTTCGTCAAGATTTTGCACTGGCAATGATGAAACTCTCGGATCTTCGGGTTTTGACAATGCCTATGGGACAGATTCGACGCACTTGTTCAAAAGTTGCATGA 1191 0.3778 MVPPLILPKLSLVILVFCILISFDQHKHNNNNTINTNNNTFNFINTIPFPLHSFSSGPVSLSATTNNHYSDSNSQSLLEYHFYRNSCPNAERIVRSMVHRLYKTNHTLIPALIRLAFHDCFIQGCDASILLEDDDYIDSEKESPPNGSLKGFDVIETIKSKLEKACPGVVSCADILVLAARDSVALVGGPFYPLYTGRRDGSNSFADIATDELPSPYADLSQMLSSFKLRGFDEREMVTLLGAHNIGVIHCKFFENRLYNLSGTNKPDPSINTEFLNVLRSRCNETDALSISASGYTSQALSSSLVEEQQEITMDSKKSLSDFGMLYYRNLLQGKGILYADQQLMKGEKTKYWVQEYAYNSTLFRQDFALAMMKLSDLRVLTMPMGQIRRTCSKVA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00327 396 CDD secretory_peroxidase 78 395 IPR033905 GO:0004601|GO:0042744
Trre8g00327 396 ProSiteProfiles Plant heme peroxidase family profile. 77 396 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Haem peroxidase superfamily signature 170 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Haem peroxidase superfamily signature 109 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Haem peroxidase superfamily signature 188 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 Gene3D - 77 218 - -
Trre8g00327 396 SUPERFAMILY Heme-dependent peroxidases 78 395 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PANTHER PEROXIDASE 25-RELATED 49 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 Gene3D Peroxidase, domain 2 219 375 - -
Trre8g00327 396 FunFam Peroxidase 81 223 - -
Trre8g00327 396 PRINTS Plant peroxidase signature 150 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Plant peroxidase signature 370 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Plant peroxidase signature 235 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Plant peroxidase signature 111 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Plant peroxidase signature 330 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Plant peroxidase signature 188 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Plant peroxidase signature 87 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 PRINTS Plant peroxidase signature 169 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 Pfam Peroxidase 94 359 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre8g00327 396 FunFam Peroxidase 214 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00327 Trre-Chr8 2359038 2361583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00327 75 395 Peroxidase AT4G33870 48.665 1.90e-115 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00327 K00430 - mof:131158483 423.705