Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00312 ATGCCAAAGAACATTCAAAAATCCCTACAAAAGTATCTCTACAAAATGAAAACTCACCCTAGGTCACAAAAATTTCGTATAACCTCTAAGAAATGGATTGCTCTCAATGATTGCAAACATCCTAGAACTCCTTCTTTCTCGTTGGACGGCAAAAACAACAACGACAACAACAAGAAGAATGACGATGAAGCTACATTAGCAGACATCGACCGTTTTCTCTTCGAGAATTTCAAGTCTTTATACCTCGATGATGACGAAAAAAATGATTGTAACAACACTAAAAGGGTCGTCTCATCAGAAGAGGAAGAAGACGAAGAAGAAGAGGAAGATGAAAAAGAAGAAACTCCAAAAGAAATATGTCCAAAATTGGGTCCCATATTTTTCGATTCATCCGAGGAAAGACCATTGGATCTTCGTGGATCTAATAGATTCTTGTTGACACGTGGCTTCTCGGGCTCCATGTCGAATACAACATCAACAACGACAACAAACACATTTGAAGAAATGGGATCATGCTCAAACTCATCAACCCCAAAAAACTTCAATAATAATTCATCTCCAAAGGAGGATCAAGTGAATATTCCTCATAATTGTGTTGTTGTGTTGGCTAGTTCGCCAAATCCTTATGATGATTTTCGAAGATCTATGGAAGAAACAGTGGAAGAAAGATTGAGGAACAATCAATGTGTGGATTGGGATTTTATGGAAGAGCTTTTGTTTTGTTATATGAACTTGAATGAAAAGAAATCATATAAGTTTATACTTAGTGCTTTTTGTGACTTGATCAGTCTCATGAGGCAAAGTTCCGAGGCCGAACCAATGAAGCCGCGGAGCGTTCGGACTGTTAGGATTGAGGGGGAGGTAAGGAAGAAGACTAAAGAATTAACATTAGAATTTGCAGGTTCAAGATGA 912 0.3794 MPKNIQKSLQKYLYKMKTHPRSQKFRITSKKWIALNDCKHPRTPSFSLDGKNNNDNNKKNDDEATLADIDRFLFENFKSLYLDDDEKNDCNNTKRVVSSEEEEDEEEEEDEKEETPKEICPKLGPIFFDSSEERPLDLRGSNRFLLTRGFSGSMSNTTSTTTTNTFEEMGSCSNSSTPKNFNNNSSPKEDQVNIPHNCVVVLASSPNPYDDFRRSMEETVEERLRNNQCVDWDFMEELLFCYMNLNEKKSYKFILSAFCDLISLMRQSSEAEPMKPRSVRTVRIEGEVRKKTKELTLEFAGSR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00312 303 MobiDBLite consensus disorder prediction 89 126 - -
Trre8g00312 303 MobiDBLite consensus disorder prediction 41 62 - -
Trre8g00312 303 MobiDBLite consensus disorder prediction 154 190 - -
Trre8g00312 303 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 65 266 IPR038933 GO:0045892
Trre8g00312 303 Pfam Transcriptional repressor, ovate 205 263 IPR006458 -
Trre8g00312 303 NCBIfam uncharacterized plant-specific domain TIGR01568 199 264 IPR006458 -
Trre8g00312 303 ProSiteProfiles OVATE domain profile. 201 264 IPR006458 -
Trre8g00312 303 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00312 Trre-Chr8 2277951 2278862 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre8g00312 Ovate 2.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00312 - - tpra:123921622 467.233