Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00306 ATGCCTGCTAAGGTTGCTGTCTCAAGTATCCGAAGTTTTTGGGGACAAAGTTTAGAAAATAAACCAAGAGGAATGGCATTCACAGACATGTCTGCTGCGTCGAGCCTTCTGTTAAGTGGGGGTCAAAATCTTCTGTTTCGTACTATCCCTGTGTTACCTAGTCTGCGCAAATCTTGTAAGTCCCCTCGAGCAATGAAGGATGGCTCTGCTAACTATCGATACCCTCCGATGACCAAAAAACCAAGATGGTGGTGGAGAACATTATCATGCATCCCTTACCTCTTGCCTTTCCATCAAGTATGGATGTATGCTCAGACAGCATACAATCTTCACCCGTTTCTCGAGAAGTTCGAATTCTATACGTACCCTTTTCTTATGTCAATTGGGACCCTACCTAGATGGTCTCTCATAGCATACTTCGTGATTGCATATCTTACAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATATCATGTTGCATTAGGAATGTTAATCGAGATAGCCTTGCAGGTTACAGGCATCGTGAGCCGTTGGATGCCGAAATCATTCTATTGGGGTAAACTTGGAATGCATTTCTGGACTACTGCATTTTTCATTTTTCTCTTTACTACCATAGAGTGTATTAGATGCGCCCTTGTTGGTATGTATGCCGATATCCCTTTTGTCTGTGATGCAGCATATATCCAAATACCATATGAATAA 708 0.4209 MPAKVAVSSIRSFWGQSLENKPRGMAFTDMSAASSLLLSGGQNLLFRTIPVLPSLRKSCKSPRAMKDGSANYRYPPMTKKPRWWWRTLSCIPYLLPFHQVWMYAQTAYNLHPFLEKFEFYTYPFLMSIGTLPRWSLIAYFVIAYLTIVRRKEWPHFFRYHVALGMLIEIALQVTGIVSRWMPKSFYWGKLGMHFWTTAFFIFLFTTIECIRCALVGMYADIPFVCDAAYIQIPYE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00306 235 Pfam Chloroplast import apparatus Tic20-like 56 228 IPR005691 -
Trre8g00306 235 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 12 234 IPR005691 -
Trre8g00306 235 NCBIfam Tic20 family chloroplast protein importer 1 235 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00306 Trre-Chr8 2224112 2225735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00306 26 231 Chloroplast and Mitochondria Gene Families AT4G03320 35.377 1.06e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00306 - - gmx:100818669 365.925