Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00305 ATGATTGGAAATGGCGGCACCTTATCCCAAGGTTCTATCTTATGTTACGCTTGTCAAATGCCTGCTAAGGTTGCTGTCTCAAGTATCCGAAGTTTTTGGGGACAAAGTTTAGAAAATAAACCAAGAGGAATGGCATTCACAGACATGTCTGCTGCGTCGAGCCTTCTGTTAAGTGGGGGTCAAAATCTTCTGTTTCGTACTATCCCTGTGTTACCTAGTCTGCGCAAATCTTGTAAGTCCCCTCGAGCAATGAAGGATGGCTCTGCTAACTATCGATACCCTCCGATGACCAAAAAACCAAGATGGTGGTGGAGAACATTATCATGCATCCCTTACCTCTTGCCTTTCCATCAAGTATGGATGTATGCTCAGACAGCATACAATCTTCACCCGTTTCTCGAGAAGTTCGAATTCTATACGTACCCTTTTCTTATGTCAATTGGGACCCTACCTAGATGGTCTCTCATAGCATACTTCGTGATTGCATATCTTACAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATATCATGTTGCATTAGGAATGTTAATCGAGATAGCCTTGCAGGTTACAGGCATCGTGAGCCGTTGGATGCCGAAATCATTCTATTGGGGTAAACTTGGAATGCATTTCTGGACTACTGCATTTTTCATTTTTCTCTTTACTACCATAGAGTGTATTAGATGCGCCCTTGTTGGTATGTATGCCGATATCCCTTTTGTCTGTGATGCAGCATATATCCAAATACCATATGAATAA 765 0.4209 MIGNGGTLSQGSILCYACQMPAKVAVSSIRSFWGQSLENKPRGMAFTDMSAASSLLLSGGQNLLFRTIPVLPSLRKSCKSPRAMKDGSANYRYPPMTKKPRWWWRTLSCIPYLLPFHQVWMYAQTAYNLHPFLEKFEFYTYPFLMSIGTLPRWSLIAYFVIAYLTIVRRKEWPHFFRYHVALGMLIEIALQVTGIVSRWMPKSFYWGKLGMHFWTTAFFIFLFTTIECIRCALVGMYADIPFVCDAAYIQIPYE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00305 254 NCBIfam Tic20 family chloroplast protein importer 1 254 IPR005691 -
Trre8g00305 254 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 23 253 IPR005691 -
Trre8g00305 254 Pfam Chloroplast import apparatus Tic20-like 75 247 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00305 Trre-Chr8 2224055 2225735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00305 45 250 Chloroplast and Mitochondria Gene Families AT4G03320 35.377 1.92e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00305 - - gmx:100818669 369.777