Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00295 ATGTGGCCTAAGAAAGTTGCAATTGATTTTCAGATCCCATTGGGAGTGATTTTAACCATTTCACCTTTTAACTATCCTGTCAATCTTGCTGTCTCAAAATTTGCTCCTGCACTGATTGCTGAAAATTCTATTGTACTCAAGCCTCCAACTCAGGTCTGTGTTGTTTTGGTGTTAGTACAAGGTGTTGAGCTTTCAATTGTGAATCAGGAGCCACATACAAATGGTCCTGTTCTAGATGATGTTTTGCTAGCAGACCCAGAGATTGCAGATGCCATTGAAAATGAAAAAACAATTGATATAACATTTACAGGAAGTGTTGGGCAGTCATTTGGGTGCTTTTTGACACCAGGAATGAATATCCACCTTGTAGGAGAAGCTAATGATTTTGTTGGGAAGGTCTTCCGCTCGATTGATTCCAACTCTGTGAAAGGATTTCCGAAAGAACCGAAAGATGCTATACAAAGGGTGAAGTGA 474 0.3987 MWPKKVAIDFQIPLGVILTISPFNYPVNLAVSKFAPALIAENSIVLKPPTQVCVVLVLVQGVELSIVNQEPHTNGPVLDDVLLADPEIADAIENEKTIDITFTGSVGQSFGCFLTPGMNIHLVGEANDFVGKVFRSIDSNSVKGFPKEPKDAIQRVK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00295 157 Pfam Aldehyde dehydrogenase family 5 106 IPR015590 GO:0016491
Trre8g00295 157 PANTHER ALDEHYDE DEHYDROGENASE 7 105 - -
Trre8g00295 157 Gene3D - 61 136 IPR036485 GO:0016491
Trre8g00295 157 Pfam GXGXG motif 94 134 IPR002489 GO:0016491
Trre8g00295 157 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 60 IPR016162 GO:0016491
Trre8g00295 157 SUPERFAMILY ALDH-like 6 107 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00295 Trre-Chr8 2137425 2139922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00295 5 54 Aldehyde Dehydrogenase Gene Family AT2G24270 72.000 3.99e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00295 K00284 - gmx:548016 107.842