Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00283 ATGAGTAACTCATTTAAGACATTCAACAAACAATTCCCTCTTTTTACTTTCCATCATCATCATAAACTCTCTCTTCACCATTCTTCTTCTTTCACACTTAATTACTCTTACACCCCCAAAATCTCTTCCTCTCTATTTCATTTATCATCACCACACTCATCATCTCAACCTACTACATTTATGGAGGTCTTCAAAGCAGTTTCTAAGCAAGAACTTGCAGCTCATGGCAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATACTTACAAGCAGCTTATCTCGTCGGTGCATAAGATATCTAATCTCTTGTGTGGAAATGATGTGAAGGGAAATCTTGGTGGAGCTCGAATAGGGATTGTAGCCAAACCGTCTGCTGAATTTGTTGCTGGAGTACTTGCGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTCTATGTGATGAATAATTCGGATGTGTCTGCCATACTGAGCACCGAAGATCATAGTGAATTAATGCAAAGCATTGCCAGTAAAACCTCTTCTCATTTTTTTCCTATTCCACCTGTTCCTTACAAGTCCTCAGAGAAGAGCAAAGATTCACAAAATGGTGAAAGTGATGCAGACAGAATTTTCCTTGAAAATATTGAACGATCAAGTGAAGATCCGGCACTGATTTTATATACTAGCGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTTCTCAGGTCCAAACCTTGACGAAAGCATGGGGATACACATCTGCGGATCAGTTTTTGCATTGTCTACCACTACATCATATCCATGAAACTTTTCTTTTGTATGCATTAATCATTATTCGATACTTTCTACATGTCCATGGGCTTTTCAATGGTTTACTGGCCCCTCTCTACACAGGTTCCACGGTTGAGTTTTTGCCGAAATTCAGTGTCAGTGGAATTTGGAAGAGATGGCGCGAGTCATATCCATCTGAAGGATCTAAGTCTGAGGATGCTATAACCGTATTCACTGGAGTTCCAACTATGTACACCCGATTAATACAAGGTTATCATGCCATGGATTCTGAGCTGCAAGCCACATCAGCATCTGGCGCAAGGAACTTGCGTCTAATGATGTGTGGATCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCATTGAAAGGTGAACGTAAAGCAGGCACTGTTGGCAAACCATTTCCTGGTGTTCAGGTCAAGATTCTTGCAGATGAGGAGCATGAGAGTGAAGGATCTGGAACTGGTGAGCTTTGCGTTAAAAGCCCTTCACTGTTTAAAGAATATTGGAAACTTCCCGAGGTAACGAAGGAATCATTTACAGATGATGGATTCTTTAAGACCGGAGATGCAGTCACTACAGATAAAGATGGATATTTCATCATTCTAGGACGTAATAACGCAGATATAATCAAGAACGGTGGCTACAAGCTGTCTGCATTAGAAATTGAATCAGTAATAGTAGAGCATCCAACTGTCTCAGAATGTTGTGTTTTGGGTTTACCGGACAAAGACTACGGAGAAATTGTTTGTGCAATTGTCGTGCCAGCGACAAAGCAGGATAAAGAGTCAAAGTCTGCTCTAAGCCTTGAAGAAGTATCCACTTGGGCAAAAAGTAAACTTGCACCTTACAAGATACCATCTCGACTAATCGTGTGGGAGTCACTCCCTCGCAATGCAATGGGAAAGCTAAATAAAAAAGAGCTTAAGAAGCTGGTGGTTCCAGAACAGTAA 1845 0.4146 MSNSFKTFNKQFPLFTFHHHHKLSLHHSSSFTLNYSYTPKISSSLFHLSSPHSSSQPTTFMEVFKAVSKQELAAHGSVAIRADQKSYTYKQLISSVHKISNLLCGNDVKGNLGGARIGIVAKPSAEFVAGVLATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQSIASKTSSHFFPIPPVPYKSSEKSKDSQNGESDADRIFLENIERSSEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLTKAWGYTSADQFLHCLPLHHIHETFLLYALIIIRYFLHVHGLFNGLLAPLYTGSTVEFLPKFSVSGIWKRWRESYPSEGSKSEDAITVFTGVPTMYTRLIQGYHAMDSELQATSASGARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEEHESEGSGTGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDKDGYFIILGRNNADIIKNGGYKLSALEIESVIVEHPTVSECCVLGLPDKDYGEIVCAIVVPATKQDKESKSALSLEEVSTWAKSKLAPYKIPSRLIVWESLPRNAMGKLNKKELKKLVVPEQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00283 614 Pfam AMP-binding enzyme C-terminal domain 519 600 IPR025110 -
Trre8g00283 614 ProSitePatterns Putative AMP-binding domain signature. 228 239 IPR020845 -
Trre8g00283 614 PANTHER ACYL-COA SYNTHETASE 45 607 - -
Trre8g00283 614 SUPERFAMILY Acetyl-CoA synthetase-like 40 611 - -
Trre8g00283 614 CDD MCS 77 599 - -
Trre8g00283 614 Gene3D - 505 612 IPR045851 -
Trre8g00283 614 Gene3D - 64 288 IPR042099 -
Trre8g00283 614 Gene3D - 289 502 IPR042099 -
Trre8g00283 614 Pfam AMP-binding enzyme 76 504 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00283 Trre-Chr8 2011232 2017008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00283 223 610 Monolignol Biosynthesis Gene Families AT4G19010 27.970 2.07e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00283 K18660 - gmx:100813324 865.914