Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00261 ATGGAGTCCTTAAAATCACCTTTTAAGGGAATAATCAGTGACATAAGAGGAAGAGCACAATGTTATAAAGATGATTGGACTTGTGCTTTCCGTTCTGGTATTGGGATATTGGCTCCAACTACTTATATTTTTTTCGCTTCTGCTTTACCTGTTATTGCCTTCGGGGAGCAGCTGAATCGAGACACAGATGGAAGATTGAGCACAGTAGAAACACTAGCTTCTACAACTATTTGTGGAATGATACATTCAATAATTGGAGGGCAACCACTCCTTATTGTAGGAGTTGCAGAACCCACCATCATCATGTATACCTACTTGTACAACTTTGCCAAAAATAAGGATGACTTGGGACAGGAACTCTTTTTGGCTTGGGCTGGATGGGTTTGTGTATGGACTTCTCTCTTGCTTTTTCTCCTAGCAATATTCAATGCTGGCAATATCATCAACAGATTCACAAGGGTTGCAGAAGAGCTTTTTGGCATGCTGATTTCAGTCTTGTTCATTCAAGAGGCTATTAAGGGAATGATAAAAGAGTTCAGTGCTCCTAAAAATGAAAACTCAATATTAGAGCACAACCAATTTCACTGGCTTTATGTGAATGGCTTATTAGGTATTATATTCACATTTGGCCTTCTCTATACAGCATTGAAGAGCAGAAGAGCAAGATCATGGTTATATGGGACAGGTTGGTTGAGAAGCTTTATTGCAGACTATGGTGTGCCTTTCTTGGTGGTAGTATGGACAGTTGTGTCATTCTCAGTGCCAAGAAAAATACCTTCCGAAATTCCAAGAAGACTAGTTGCTCCTCTGGCTTGGGAATCTACATCTTTACACCATTGGACAGTTATCAAAGACATGGGAAGGGTTTCTCCAACATATATATTTGCTGCTTTTATTCCAGCATTGATGGTGGCAGGGCTTTACTTCTTTGATCATAGTGTTGCTTCTGGGATGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATACCATTATGACATATTCTTACTTGGATTCATGACTTTGATTTGTGGACTACTTGGCTTACCACCTTCAAATGGTGTTCTGCCTCAATCACCTATGCACACTAAGAGCCTTGCAGTTCTTAAGGGTCTGATGATTAGAAGAAAGATGGTTGAAAGTGCGAAGGAAAGCATAAAAAAGAAAGCTAGCAACTCTGAAATCTATGGAAAGTTGCAAGCAGTGTCTGTAGAAATGGACAGCAGCCCGGTTACTTCTGTGGAAAGAGAATTGGAGAACTTAAAAGAGGTAGTCCTAAAAGGTGAAGATAAAGGAGACAACAAAAAGGATACATTTGACCCTGAGAAACATATTGATGCATGTTTGCCTGTTAGAGTAAATGAGCAAAGAATGAGCAATCTTTTACAATCACTGTTTGTTGGAGCATCAGTTTTTGCTATGCCTATCATAAAAAAGATTCCAACTTCTGTTTTGTGGGGATATTTTGCATACATGGCCATTGATAGTCTTCCTGGTAACCAATTCTGGGAAAGGATACTGCTTCTCTTTGTAGCACCTAGTAGGTGGTTCAAGTTATTGGAAGGTCACCATGCTTCTTTTGTGGAATCAGTACCAATCAGATACATAGTCTTCTTCACAATCTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTAACATGGATTCCAATAGCAGGAATCTTGTTTCCATTGCCTTTCTTTTTACTGATCTTGGTGAGGCAATATATCCTTCCTAAGCTGTTTAGTCCTCATCATCTAAGAGAACTTGATGCAGCTGAATATGAAGAAATTGCTGGTGCTCCAAGACTCTCTAGGGATTCGCCTAGTTTTGGTTCAATGGAAGTGTCTGATAGTGAAATATTAGATGAATTAACTACCAACAGAGGAGAGTTGAAGGTCAGAACTCTAAGCTTTAGAGAGGAAAGACATGGTCAAGTGATATATCCTAATGAAATAATATGTGAAGATGAATCATGA 1986 0.3912 MESLKSPFKGIISDIRGRAQCYKDDWTCAFRSGIGILAPTTYIFFASALPVIAFGEQLNRDTDGRLSTVETLASTTICGMIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKNKDDLGQELFLAWAGWVCVWTSLLLFLLAIFNAGNIINRFTRVAEELFGMLISVLFIQEAIKGMIKEFSAPKNENSILEHNQFHWLYVNGLLGIIFTFGLLYTALKSRRARSWLYGTGWLRSFIADYGVPFLVVVWTVVSFSVPRKIPSEIPRRLVAPLAWESTSLHHWTVIKDMGRVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKEFNLKKPSAYHYDIFLLGFMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKGLMIRRKMVESAKESIKKKASNSEIYGKLQAVSVEMDSSPVTSVERELENLKEVVLKGEDKGDNKKDTFDPEKHIDACLPVRVNEQRMSNLLQSLFVGASVFAMPIIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVAPSRWFKLLEGHHASFVESVPIRYIVFFTIFQCVYFLVCFGVTWIPIAGILFPLPFFLLILVRQYILPKLFSPHHLRELDAAEYEEIAGAPRLSRDSPSFGSMEVSDSEILDELTTNRGELKVRTLSFREERHGQVIYPNEIICEDES 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00261 661 FunFam probable boron transporter 2 18 60 - -
Trre8g00261 661 PANTHER ANION EXCHANGE PROTEIN 5 601 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre8g00261 661 Gene3D Helical hairpin bin 18 60 - -
Trre8g00261 661 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016020
Trre8g00261 661 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016020
Trre8g00261 661 Pfam HCO3- transporter family 198 371 IPR011531 GO:0006820|GO:0016020
Trre8g00261 661 Coils Coil 413 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00261 Trre-Chr8 1880428 1885957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00261 1 656 Antiporters AT1G74810 68.516 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00261 K24194 - gmx:100811184 1037.71