Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00206 ATGCAGATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACAAGGAATTTACAGTTGAACTCGAGATATTAAGAAGAGTACAACACAAGAATCTTATTGGTTTACGCGGCTATTGTGCCGAAGGACAAGAACGATTAATTGTGTATGATTATATGCCAAATTTTAACATGTTCTCCCATCTTCATGGACCACAATCAGCAGAATGCCTTCTTGATTGGAATCGGCGTATGAATATTGCCATTGGATGTGCCGAGGGAGTTGTATACCTTCACCACCAAGCAACACCGTGTATCATCCACAGGAATATCAAGTCAAGTAGTGTGTTGTTGGATTCAAATTTCAAAGCACTAATTGGTGGTTTCGGGTTTGCTAGGTTGATCCCTGATGGCGAAACACAAGTGACTACAAATGTTAAGGGTACCTTAGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAGTGAAAGTTGTGATGTTTATAGCTTTGGTATCCTCCTTCTAGAACTAGCTAGTGGAAGAAAACCAATTGTAAATGTTAGTTCCACATTGAAGCAATCAATAGTTGATTGGGCATTGCCATTGGTTTGTGAGAAGAATTTCAATGAACTTGCTGATCCAAGACTAAATGGTAACTATGTAGAGGAAGAACTTAAAAGAGTTATTATTGTTGGATTGATATGTGCTCAAAATTTACCTGAGAATAGACCTACCATGCTTGATGTGGTAGAGCTATTGAAGGGAGAATATAAAGGTAAATTTTCACATATAGAGAGTAGTGAAATGTTTAGAAGCCCTATAGTTGTAGAACACTGA 825 0.3806 MQIAVKRLKVWSNKADKEFTVELEILRRVQHKNLIGLRGYCAEGQERLIVYDYMPNFNMFSHLHGPQSAECLLDWNRRMNIAIGCAEGVVYLHHQATPCIIHRNIKSSSVLLDSNFKALIGGFGFARLIPDGETQVTTNVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGRKPIVNVSSTLKQSIVDWALPLVCEKNFNELADPRLNGNYVEEELKRVIIVGLICAQNLPENRPTMLDVVELLKGEYKGKFSHIESSEMFRSPIVVEH 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00206 274 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Trre8g00206 274 Gene3D Transferase(Phosphotransferase) domain 1 55 265 - -
Trre8g00206 274 Pfam Protein tyrosine and serine/threonine kinase 1 248 IPR001245 GO:0004672|GO:0006468
Trre8g00206 274 SUPERFAMILY Protein kinase-like (PK-like) 2 249 IPR011009 -
Trre8g00206 274 FunFam PTI1-like tyrosine-protein kinase At3g15890 54 265 - -
Trre8g00206 274 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre8g00206 274 PANTHER OS01G0253100 PROTEIN 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00206 Trre-Chr8 1539210 1540141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00206 3 245 Trihelix Transcription Factor Family AT1G68690 46.559 1.79e-75 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Trre8g00206 PK_Tyr_Ser-Thr 4.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00206 - - gmx:100791193 434.106