Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00159 ATGGCAACAATTGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGACAACCTGGTAGTAAGAAATATGAACACTTGCTGAAACTTGAGAGAGCTTCTGCGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTCACAAAGCAATTGTCGGATGCGGTGCCGTTTTCCATGTTGCTAGTCCTGTACCTTCGACAGTTGTACCAAATCCTGAGATGGAAGTGATTGAGCCTGCAGTCAAGGGAACTGCTAATGTACTTGAAGCTTGTCTTGATGCTAAAGTGGAACGCGTCGTCTTTGTATCATATGGAGCTGCTGTTGCTTTCAATCCTAATTTCCCGAAAGATAAAGTGATTGACGAGTCTTGTTGGTCTGACAAAGACTACTACAAAAAAACTAAGAACTGGTATTGTTATGCCAAGACAGAAGCAGAAGAGCAGGCCCTGGATTTCGCGAAAAGAATCGGGCTTGATGTTGTTAGCATTTGTCCTACCCTTGTTTTGGGGCCAATTTTACAGTCAACCACTAATTCAAGTACCTTGGTTCTCATCAAAATTTTAAAAGGCTGTGATACATTGGAGAATAAGAATCGTTGGATAGTTGACGTACGAGACGTAGTTGATGCGATACTTTTGGCTTATGAGAATCACAATGCAGAAGGGAGATACATATGCACTTCACACTCTGTCACGGAACGAGATTTGGTGGAGAAATTGAAGAGTATATTTCCAAACTACAAGTACCCTACAAACTATACTGAGGTGGATGATTATAGAATGCTGAGCTCTGAGAAACTGCAAAGTTTAGGTTGGAAATTCAGGCCTTTGGAGGAAACACTTATTGATTCTGTTAAAAGTTATGAAGAAGCTGGACTACTTCAATCACAATGA 906 0.4095 MATIGGANKKVCVTGAGGQPGSKKYEHLLKLERASANLTLFEADILNYESVHKAIVGCGAVFHVASPVPSTVVPNPEMEVIEPAVKGTANVLEACLDAKVERVVFVSYGAAVAFNPNFPKDKVIDESCWSDKDYYKKTKNWYCYAKTEAEEQALDFAKRIGLDVVSICPTLVLGPILQSTTNSSTLVLIKILKGCDTLENKNRWIVDVRDVVDAILLAYENHNAEGRYICTSHSVTERDLVEKLKSIFPNYKYPTNYTEVDDYRMLSSEKLQSLGWKFRPLEETLIDSVKSYEEAGLLQSQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00159 301 CDD FR_SDR_e 11 276 - -
Trre8g00159 301 Pfam NAD dependent epimerase/dehydratase family 11 224 IPR001509 -
Trre8g00159 301 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 293 IPR036291 -
Trre8g00159 301 Gene3D - 5 301 - -
Trre8g00159 301 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 289 - -
Trre8g00159 301 FunFam Dihydroflavonol reductase 19 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00159 Trre-Chr8 1140120 1142757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00159 10 298 Monolignol Biosynthesis Gene Families AT2G33590 54.633 2.33e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00159 - - gmx:100784817 429.098