Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00106 ATGATCATAAACGTGAGAGATTCGACAATGGTGCGGCCGTCGGAGGAGGTTCCACAACGGACGCTATGGAACTCCAATGTTGATTTGGTGGTACCGAATTTCCACACACCAAGTGTTTATTTCTATAGATCAAACAATGGGACTTCGAATTTTTTTGACGCCAAGGTTATGAAGGAAGCTCTAAGTAAGGTGCTTGTCCCGTTCTATCCAATGGCTGGCCGTCTTCGTCGAGATGAAGACGGCCGTGTTGAGATTGACTGTGATGGTCAAGGAGTGCTCTTTGTTGAGGCCGACACCAGGGCAGTCATCGATGATTTTGGTGATTTTGCTCCCACACTTGAGCTCCGTCAACTAATCCCAGCCGTTGATTATTCTCGTGGAATAGAAACTTATCCCCTCCTAGTGTTGCAGGTAACACATTTCAAATGTGGAGGAGTGTCCCTTGGTGTTGGTATGCAACATCATGTAGCAGATGGAGCTTCTGGTCTTCACTTCATCAATACATGGTCAGACGTAGCTCGCGGCCTAGACGTTTCAATCCCACCGTTCATCGACCGGACACTACTCCGTGCCCGCGATCCACCTCGGCCTGTTTTTGATCACATTGAATACAAACCACCACCATCCATGAAGACTTCTCAACAGCCTACAAAACCAGGCTCAGACGGCGCAGCAGTTTCGATTTTCAAATTGACTCGCGAACAACTCAACACGTTGAAAGCTAAGTCCAAAGAAGCCGGAAACACAATTCACTACAGCTCTTATGAGATGTTAGCCGGTCATGTTTGGAGAAGTGTGTGCAAAGCAAGATCGTTGCCTGATGATCAAGAAACCAAATTGTATATTGCAACCGATGGACGGGCAAGATTGCAGCCTCCACCTCCACCGGGCTACTTCGGCAATGTGATTTTCACAACAACGCCGATAGCTATAGCAGGCGATCTCATGTCGAAACCTACATGGTATGCTGCGAGTAGGATTCACAACGCGTTGTCGCGAATGGACAACGAGTATTTAAGATCTGCACTTGATTTTCTTGAGCTACAACCTGATTTAAAAGCCCTTGTTCGCGGTGCGCATACTTTCAAGTGCCCGAATCTAGGTATTACTAGTTGGGCTAGGCTTCCGATTCACGATGCTGATTTTGGTTGGGGAAGGCCTATTTTCATGGGACCAGGTGGAATTGCTTATGAAGGTTTGTCTTTCATAATTCCAAGCTCAACAAATGATGGAAGTTTATCTGTGGCAATAGCTCTTCAGCATGAGCATATGAAAGTGTTTAAGGAATTCTTGTATGATATTTGA 1305 0.4613 MIINVRDSTMVRPSEEVPQRTLWNSNVDLVVPNFHTPSVYFYRSNNGTSNFFDAKVMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTRAVIDDFGDFAPTLELRQLIPAVDYSRGIETYPLLVLQVTHFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTLLRARDPPRPVFDHIEYKPPPSMKTSQQPTKPGSDGAAVSIFKLTREQLNTLKAKSKEAGNTIHYSSYEMLAGHVWRSVCKARSLPDDQETKLYIATDGRARLQPPPPPGYFGNVIFTTTPIAIAGDLMSKPTWYAASRIHNALSRMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQHEHMKVFKEFLYDI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00106 434 Pfam Transferase family 3 429 - -
Trre8g00106 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 431 - -
Trre8g00106 434 MobiDBLite consensus disorder prediction 199 223 - -
Trre8g00106 434 Gene3D - 214 434 IPR023213 -
Trre8g00106 434 Gene3D - 1 206 IPR023213 -
Trre8g00106 434 FunFam Spermidine hydroxycinnamoyl transferase 1 204 - -
Trre8g00106 434 FunFam Tryptamine hydroxycinnamoyl transferase 210 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00106 Trre-Chr8 746300 749461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00106 1 434 Monolignol Biosynthesis Gene Families AT5G48930 77.880 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00106 K13065 - gmx:100820075 823.542