Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00105 ATGGGGATATATCTGAGTTCGCCAAAAACTGAGAAGGCATCTGAAGATGGTGAGAATGAAATGCTTCGATTCGGTTTGTCATCAATGCAGGGCTGGCGTGCTACTATGGAAGATGCTCATGCAGCTCATCCGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCATGGAGGTAAAGCTGTTTCAAAATTCTGTGCGAAGTTTCTACATCAGCAGGTGCTTAGGCATGAAGCTTACGTAGCTGGAGATATAGCCACGTCTTTACAGAAATCTTTCCTCAGAATGGATGAAATGATGCGCGGACAAAGAGGATGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAAGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGAACGTGCTGATGAGTGGGCTTTTGAGGAGGGACCCCATTCTGATTTCAGTGGGCCAAACTCTGGAAGCACAGCGTGTGTAGCTGTCATCCGAGGAAAAAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTGTTATCAAGGAAAGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGACCTTGAGGTTGAGAAAGACAGGATTCTGAAAGCTGGTGGTTTCATCCAAGTTGGACGAGTCAATGGAAGTTTGAACTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAAAACAAGTATTTGCCTGCTGAAAAGCAGGTTGTGACTGCTGATCCGGATGTAACTTCAGTCGAGCTTTGCGATGATGATGAGTTTCTTGTGATAGCTTGTGATGGGATATGGGATTGCATGTCCAGCCAACAGCTTGTGGACTTTATACATGGCCACTTAAAGACAGAGAATAAACTTTCTGCAGTTTGCGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAATATTCCGACTTCAGATGCTTCTGTCACAGACCAGCCTGAGCCATCTGCTCAACCGACTCCAGATACATCTGCTCAACAGTCTGAAGCCGAGCAGAAAGTAGAATCGAAGTGA 1101 0.445 MGIYLSSPKTEKASEDGENEMLRFGLSSMQGWRATMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKFLHQQVLRHEAYVAGDIATSLQKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPRSSEANERADEWAFEEGPHSDFSGPNSGSTACVAVIRGKKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQVVTADPDVTSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGHLKTENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNIPTSDASVTDQPEPSAQPTPDTSAQQSEAEQKVESK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00105 366 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Trre8g00105 366 CDD PP2Cc 23 328 IPR001932 -
Trre8g00105 366 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Trre8g00105 366 Pfam Protein phosphatase 2C 138 313 IPR001932 -
Trre8g00105 366 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Trre8g00105 366 Gene3D - 1 329 IPR036457 -
Trre8g00105 366 PANTHER PROTEIN PHOSPHATASE 2C 18 327 IPR015655 GO:0004722|GO:0006470
Trre8g00105 366 MobiDBLite consensus disorder prediction 334 360 - -
Trre8g00105 366 SMART PP2C_4 13 326 IPR001932 -
Trre8g00105 366 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Trre8g00105 366 MobiDBLite consensus disorder prediction 334 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00105 Trre-Chr8 727851 733875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00105 1 329 PP2C-type Phosphatase Gene Family AT2G25070 76.970 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00105 K17499 - gmx:100776787 649.818