Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00101 ATGGCCTCATCCTCATCTTTGCTGTTGTTGAGTTTCTTCTTCTTGTTCACTACTCTTCTTCCTGTGTCTGCTACTGACCATATTGTAGGTGCTAACCGTGGCTGGAACCCTGGGATTAACTACACTCTTTGGGCTAATAACCATACTTTCTATGTCGGTGATTATATTTCATTTAGGTACCAGAAGAATCAGTACAATGTGTTTATGGTAAACCAAACAGGTTATGACAACTGCACAACAGAAGGTGCTATTGGGAATTGGACTAGTGGCAAAGATTTCATACTATTCAACAAAACTATGAGATATTACTTCATTTGTGGTAATGGCCAATGCATGAATGGAATGAAAGTCTCAGTTTTTGTTCATCCACTTCCTTCTCCACCTCCTTCCTCATCTCATGAACATCATTCAACACCAAAATCTGCTGCTCCTATGCTCTTGGAATATTTAGGACTTAAGTCTCTAATGTTGTCTTTTGTTTTTGTTTTGTTTGGATTTGTTTTGGTTTAA 510 0.3804 MASSSSLLLLSFFFLFTTLLPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDYISFRYQKNQYNVFMVNQTGYDNCTTEGAIGNWTSGKDFILFNKTMRYYFICGNGQCMNGMKVSVFVHPLPSPPPSSSHEHHSTPKSAAPMLLEYLGLKSLMLSFVFVLFGFVLV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00101 169 Pfam Plastocyanin-like domain 35 115 IPR003245 GO:0009055
Trre8g00101 169 Gene3D - 23 124 IPR008972 -
Trre8g00101 169 PANTHER BLUE COPPER PROTEIN 24 131 IPR039391 GO:0009055
Trre8g00101 169 ProSiteProfiles Phytocyanin domain profile. 25 123 IPR003245 GO:0009055
Trre8g00101 169 SUPERFAMILY Cupredoxins 24 122 IPR008972 -
Trre8g00101 169 FunFam Lamin-like protein 23 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00101 Trre-Chr8 707281 709811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00101 14 131 Phytocyanin Superfamily AT5G15350 44.628 1.45e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00101 - - gmx:100305555 202.216