Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00081 ATGTCGGGGCAATCACAGCGTTTGAATGTGGTCCCCACAGTGACAATGCTTGGTGTTGTGAAAGCACGTTTGGTTGGTGCAACAAGAGGCCATGCACTTCTGAAGAAGAAAAGTGATGCCTTAACTGTTCAGTTTCGTCAGATCCTGAAAAAGATTGTTTCAACAAAGGAATCAATGGGTGATATCATGAAAACATCTTCATTTGCATTAACCGAGGCTAAGTATGTAGCTGGTGATAATATCAAGCATGTTGTGCTTGAGAATGTTAAGGAAGCTTCACTCAGGGTGCGTTCTCGTACTGAGAACGTAGCTGGAGTGAAACTTCCAAAATTTGAGTACTCTGCTGACAGTGAGGCCTCAAAGAATGACCTTACCGGGTTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTGTCGTGTTGCTTATATTAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCGCTTCAGACCTCTTTTCTTACCCTTGATGATGCTATTAAGACTACTAACCGTAGGGTTAATGCTCTTGAGAATGTTGTTAAGCCACGGTTGGAGAATACTATTAGTTACATTAAGGGTGAGTTGGATGAGCTCGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGCTATAAGAGGAGGGAAATTGAAAGGAAGATGGTGCTTGCTAGGGAACAACAGGCTGTTGAAAAGTTACAATTGCTGAAAGGGGTTTCGTATGAGTCCTCAAACTTGTTGGCTGGTACAACTGGTAAAGACGAGGATATCCTTTTCTAA 777 0.4311 MSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFEYSADSEASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKMVLAREQQAVEKLQLLKGVSYESSNLLAGTTGKDEDILF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00081 258 Gene3D - 1 199 - -
Trre8g00081 258 FunFam V-type proton ATPase subunit D 1 199 - -
Trre8g00081 258 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Trre8g00081 258 NCBIfam V-type ATP synthase subunit D 9 212 IPR002699 GO:0046961
Trre8g00081 258 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 258 IPR002699 GO:0046961
Trre8g00081 258 Coils Coil 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00081 Trre-Chr8 572389 573165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00081 1 258 Primary Pumps ATPases(2) AT3G58730 77.481 6.64e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00081 K02149 - gmx:100801612 429.869