Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00064 ATGGAGATGGGTGTTGGTGCCGATTTAACATCGGCATCAAAAGATGTAGCAAACGTGGTAGACGAATACATTCCTGTGTCCGAAGATGATGAGTCCAAACCAGTAATCGGTAAAGTGTTTGATTCTTTAAAAGAAGCAGGAAATTTTTATAAAATGTATGCACATTCTGTTGGATTTAGTGTGTGTAGTTCGTCTCAAACAAACGATAAATATGGTGTAAAATGGAAATATTTTCTATGTTCAAAAGAAGGTTTTAAAGTAGTAAAACAGATAGATGGATTAGTTATTAGTGAAAATGGTTTGCAAGGCTTGTAA 315 0.3429 MEMGVGADLTSASKDVANVVDEYIPVSEDDESKPVIGKVFDSLKEAGNFYKMYAHSVGFSVCSSSQTNDKYGVKWKYFLCSKEGFKVVKQIDGLVISENGLQGL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00064 104 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 89 - -
Trre8g00064 104 Pfam FAR1 DNA-binding domain 48 90 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00064 Trre-Chr8 483223 483537 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre8g00064 FAR1 9.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00064 - - mtr:120577464 102.449