Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00021 ATGAAAGTTGGTGGGATTTCCATATCCACCCCAAAGCTACCAATGCCCATCAATCTCAATAACAGCACTGCTGCATATTATTCATTTCGCCGAACAAAGACAATGACGGCACACAAAAAACCATTATTGATAGAAGCCGGAGAATCCTCAGACGGAAGCAAGAAGACTAGCAAGATTCCAAAAGGATACATTGCTGTTTATGTCGGGTTGGAGTTTAGAAGGTTTGTGATTCCGATAAGTTTCTTGAGCATGCCTGAGTTAAAGGGTTTGATGGATGATGTGGCTGAGGAGTTTGGTTGTGATTATCATGCTGATGGTGCTCTTCATATTCCATGTGATGAAGATTATTTTCGCAATGTTTTGATTAATTGTTTTGCCACACAACGAAGGGTATCTTCTAAGAATTATAAGATTAAACTTGGTAATAAGATTCCCTTAATACACTAG 447 0.3893 MKVGGISISTPKLPMPINLNNSTAAYYSFRRTKTMTAHKKPLLIEAGESSDGSKKTSKIPKGYIAVYVGLEFRRFVIPISFLSMPELKGLMDDVAEEFGCDYHADGALHIPCDEDYFRNVLINCFATQRRVSSKNYKIKLGNKIPLIH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00021 148 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 53 121 IPR003676 GO:0009733
Trre8g00021 148 Pfam Auxin responsive protein 39 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00021 Trre-Chr8 182619 183065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00021 59 121 Calmodulin-binding Proteins AT3G43120 50.794 2.89e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00021 K14488 - psat:127107164 225.713