Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00017 ATGATGGATGCAGACATGGAGTCTGGCTCTTACCATGACAGGCTAAGAACTTTCCCTAACATGCGTGCTAAACCTTACACCCCACTGGTATTTCGTATTCTATTGGGTATAAATGTTCGTGTCCTGTTCCTTCTTTTACTGCTCGGCTTTGGAGCTATCTTTTACATGGGTGCAAAGACATCTCCAATTATTGTTTTTGTCATCTCTATTTGTATTCTCAGCTTCTTTGTCGCCATATATCTTATGAAGTGGGTGCTCGCTAAAGATGAGGGTCCCCCTGAAATGGTTCAGATAGCTGATGCTATACGGGATGGAGCTGAAGGATTTATCAGGACACAGTACGGAACTATATCCAAGATGGCTATGTTGCTTGCTCTTGTCATTCTTTGCATATATTTGTTCCGCAGCACAACTCCTCAACAGGAAGCTTCTGGCATAGGAAGGACAACAACTGCATACATCACTGTAGCTTCTTTTCTTTTAGGCGCCCTTTGTTCAGGTTTTGCCGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCCGCGAGACGGTCTTCAAGAGAGGCATTGCAGATAGCTACTCGTGCAGGTGGTTTAGCAGCTCTCATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGATGGGAGTGGACACGCCAGGTTCAATGAAGGTTACTGATTTGCCTCTACTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTCGCACTGTTTGCTCAGTTGGGTGGTGGAATATACACTAAAGCAGCTGATGTTGGGGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGACCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCGGATCTTTTTGAAAGTATCGCAGCTGAAATAATCAGTGCCATGATACTTGGGGGAACAATGGCACAACGATATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCAGTGGGAATATTTTCTATTCGGGGTACACGTGAATCCGGAGTATTGTCTCCTATAGAAGATCCAATGGCAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCGGCATGGTTCAATTTTGCTTTGTGCGGGTTGATTGGTATTATTACAGCCTACGTTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCATGAGCCAGTGCGCACATTAGCCCTTTCTAGCTCTACTGGCCATGGGACCAACATAATTGCCGGGGTCAGTTTGGGGCTCGAATCTACAGGTCTTCCAGTCCTTGTCATCAGTGTGGCAATTGTCTCAGCTTACTGGTTGGGCCAGACTGCTGGACTAATAGATGAAACCGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTAGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATAGCCGATAATGCTGGAGGAATTGTAGAAATGAGTCAACAGCCCGAAAGTGTTCGAGAAATCACTGATGTCCTTGATGCCGTGGGGAACACAACCAAAGCCACCACCAAAGGATTTGCTATTGGTTCTGCTGCGCTTGCATCTTTCCTTCTGTTCAGTGCTTATATGGATGAAGTTTCTTCATTTTCTCGTGAACCTTTTAAACAGGTTGATATTGCAATTCCTGAAGTTTTCGTTGGTGGGTTGCTGGGTGCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCCGGTATAATGGATTACAAGGAGAAACCGGATTATGCTCGCTGTGTTGCAATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCTCTGGCAATCATTTCACCTATTGTAGTTGGTTTTGCATTTCGAATTTTGGGCTACTACACAGGGCAACCCTTACTTGGGGCTAAAGTTGTGGCTGCTTTGCTGATGTTTGCAACAGTGTCTGGTATTCTAATGGCACTTTTTCTGAACACGGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCAATAACCGGAGATACAGTGGGAGACCCATTCAAAGACACAGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACGATTACTTTGGTAATGGCTCCCATCTTCCTGTGA 2385 0.4499 MMDADMESGSYHDRLRTFPNMRAKPYTPLVFRILLGINVRVLFLLLLLGFGAIFYMGAKTSPIIVFVISICILSFFVAIYLMKWVLAKDEGPPEMVQIADAIRDGAEGFIRTQYGTISKMAMLLALVILCIYLFRSTTPQQEASGIGRTTTAYITVASFLLGALCSGFAGYVGMWVSVRANVRVSSAARRSSREALQIATRAGGLAALIVVGMAVIGIAVLYATFYVWMGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRYPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVLSPIEDPMAILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLIGIITAYVFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTGLPVLVISVAIVSAYWLGQTAGLIDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSSFSREPFKQVDIAIPEVFVGGLLGAMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYARCVAIVASASLREMIKPGALAIISPIVVGFAFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAITGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFL 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00017 794 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 61 794 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre8g00017 794 NCBIfam V-type H(+)-translocating pyrophosphatase 66 793 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre8g00017 794 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 88 793 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre8g00017 794 PIRSF H+-PPtase 56 794 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre8g00017 794 Pfam Inorganic H+ pyrophosphatase 73 789 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00017 Trre-Chr8 161357 167395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00017 1 794 Primary Pumps ATPases AT1G16780 85.893 0.0 1413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00017 K23025 - gmx:100787805 1362.82