Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05958 ATGAAGAACATTCTTAAGAAGCTTCATATAATGTCTAATAATCAATCAGAAGATGCACAATCAGAAAGGAGCAATAAGTCAAATGATGGCTCATCTTCATCTCCAACAACCAGAAAGAAGCTTTCGAATTGGTTGCAATCCGTTTCTTCTAATAGGCAGACTCCTAGCAGTCCTCCATCACCAAACCTGGCAAGAGGAGAAAGAGTGGAGCTATCTGATTCAGTGAGTTTTGGTGGTAGTGGTGGTGGTGGTTTGGATATGGTGGTTTGTGATTCCACGAAGCGTGATTCGGGGTCTAGCAGTTCAAGGGATCCTGAAGTGGAAGAAGAATATCAGATTCAACTTGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTTGCATATCGATACTGGAATTACAATGCTCTTGGCTATGATGACAAGATCTCAGACGGTTTCTACGATCTGTACGGTGTCTTAACCAATTCAACCTCGACAAGAATGCCTTCTCTGGTAGATCTGCAAGGAACACCAACTGTAAATGATGTAAAATGGGAAGCAGTCTTGGTCAATAGGGTTACCGATTCCAATTTGTTGAAACTTGAGCAAAAGGCCTTGGAGCTTGCAGTGAAGTCAAGAGATGATTTTGAAATAGTTGTAGATAGAAATTTGGTCCACAAGCTTGCAATACTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTCGGTAGCATGGTTTTGCCACTTGGATCATTGACCATTGGATTGGCTCGGCATCGTGCTTTGTTATTTAAGGTATTAGCTGATAGTTTGGGCATCCCTTGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCAGATGATGTGGCAATGAACTTTGTCAAGATTGATGAGGGAAGGGAGTACATTGTTGACCTCATGGCAGCTCCTGGAACTCTTATTCCATCTGATGCAACTGGATCACATATTGAGTATGATGATTCTTCTTTTGTCGCAAGTCCTTCATCAAGAGACCTTGATTCATCTCACATTGCATCGTTCAGCACTGGGGTTGGAAGTTCATCCGAAGAAACTTCAGAGTTTGCAAATTTTGATAAAGGAAATAGATACAAACATTTTGCCTATGCGGAGAAGGAATCTGATGTAAGTAGCCCCCCCACTGGCAAGGAAGAATTAAAGCAACCATTAAACGAATTCAAAAATATCCCTAACGTAGAAAAGATCAAGGCGAGGGAATCTGTTAGCAGACCTAATAATTATCCATACACGCACGGAAGATCTCCTTCTTGGACAGAAGGGATCAGTTCCCCGGCAGCACATCGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCCAAGGAAAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTACTCGAAAGTGGCGTTGTTGCTCCTCCAAACTTGTTTTCTGAAATTTATCATGAGCAGCTAGGTTCCCAAAATGAGACCAATTCTCCAATCGAAGAAAAAGATGAATATAAACTGGGAAGTGCGCAGAAAGAAGATACAGTTGGCGATAATCTAGGTCCTCCTCGATTTTTGCCTCCGTTGCCTCCCCACCGAATTCATCCCAAAGCAAGTCCTAGCAATCAACTGGAGCATTCTAAGCCTGTAGAAGGTTTGGGAATTGGCCTTTCTCTTGATACAAGAGAAGCTGCTGGACAGCACACACATTCCGATGCAGAGGCAACACAAGTAAAGTATGGGAAAAATGTCCCGGTTGCTGCTGCTGCAGTGGCTGCGGCTGCTGTTGTTGCATCTTCAATGGTAGTTGCGGTGGCAAAGTCAAACACTGACTCAAATTTTGAGATTCCTGTAGCGGCAGCTGCTACTGCTACCGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAATAAACAGTATGAGCAGGGGAATCGAAGTGACGGAGATACTGATGGTTCTAGTAATGATCCAAAAGGTAGCGGTGATGGAAAGAATAATGCTTTAGGAGCAAACTCAGAAGGCGAGCGAAAATCTGATAGATCAGTAGGTAATGATAGCACAAAATCTGATTCTGCACTAGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCACGATGGGGGAGCGTATCGGACTTGGATCATACGGAGAAGTGTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTACTTCAAGATATCTCTGGGGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAGAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTCGACCACCAAATCTTTCAATCGTTACTGAATTTCTTCCTAGAGGGAGTCTGTATAGATTAATTCATCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTGGATACTGCTCGAGGAATGAACTATTTGCACAACAGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAACCTTCTCGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTCGGCTTGTCTCGAATGAAGTATAGTACATTCCTTTCTTCTAGATCAACTGCGGGAACAGCCGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTCAGCTACGGGGTCATATTGTGGGAACTCTCTACTCTGCGGCAACCTTGGGGAGGAATGAATCCCATGCAAGTTGTTGGTGCTGTCGGTTTCCAGCATCGCCGTCTGGACATTCCAGATGATGTGGACCCTACCATTGCAAATATTATTAGACAATGTTGGCAGACTGATCCAAAGTTGAGGCCCACTTTTGCTGAAATTATGGCATTACTGAAGCCATTGCAGAAGCCAATTACCAGTTCTCAAGCGCAGAGAGCAAGTGCCCGCAACACATCATCGCGAGTTGCTGAAAATCCTGCTGAATAA 3078 0.4353 MKNILKKLHIMSNNQSEDAQSERSNKSNDGSSSSPTTRKKLSNWLQSVSSNRQTPSSPPSPNLARGERVELSDSVSFGGSGGGGLDMVVCDSTKRDSGSSSSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGVLTNSTSTRMPSLVDLQGTPTVNDVKWEAVLVNRVTDSNLLKLEQKALELAVKSRDDFEIVVDRNLVHKLAILVAEYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGMQYTGSDDVAMNFVKIDEGREYIVDLMAAPGTLIPSDATGSHIEYDDSSFVASPSSRDLDSSHIASFSTGVGSSSEETSEFANFDKGNRYKHFAYAEKESDVSSPPTGKEELKQPLNEFKNIPNVEKIKARESVSRPNNYPYTHGRSPSWTEGISSPAAHRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHEQLGSQNETNSPIEEKDEYKLGSAQKEDTVGDNLGPPRFLPPLPPHRIHPKASPSNQLEHSKPVEGLGIGLSLDTREAAGQHTHSDAEATQVKYGKNVPVAAAAVAAAAVVASSMVVAVAKSNTDSNFEIPVAAAATATAAAVVATTAAVNKQYEQGNRSDGDTDGSSNDPKGSGDGKNNALGANSEGERKSDRSVGNDSTKSDSALDDVAEYDIPWEEITMGERIGLGSYGEVYRGEWHGTEVAVKRFLLQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPTIANIIRQCWQTDPKLRPTFAEIMALLKPLQKPITSSQAQRASARNTSSRVAENPAE 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05958 1025 PRINTS Tyrosine kinase catalytic domain signature 817 830 IPR001245 GO:0004672|GO:0006468
Trre7g05958 1025 PRINTS Tyrosine kinase catalytic domain signature 922 944 IPR001245 GO:0004672|GO:0006468
Trre7g05958 1025 PRINTS Tyrosine kinase catalytic domain signature 856 874 IPR001245 GO:0004672|GO:0006468
Trre7g05958 1025 PRINTS Tyrosine kinase catalytic domain signature 903 913 IPR001245 GO:0004672|GO:0006468
Trre7g05958 1025 PRINTS Tyrosine kinase catalytic domain signature 966 988 IPR001245 GO:0004672|GO:0006468
Trre7g05958 1025 CDD STKc_MAP3K-like 749 995 - -
Trre7g05958 1025 FunFam Serine/threonine-protein kinase isoform 1 734 821 - -
Trre7g05958 1025 Gene3D Phosphorylase Kinase; domain 1 736 820 - -
Trre7g05958 1025 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 110 1006 - -
Trre7g05958 1025 MobiDBLite consensus disorder prediction 677 704 - -
Trre7g05958 1025 MobiDBLite consensus disorder prediction 549 585 - -
Trre7g05958 1025 SUPERFAMILY Protein kinase-like (PK-like) 731 994 IPR011009 -
Trre7g05958 1025 ProSitePatterns Protein kinases ATP-binding region signature. 749 770 IPR017441 GO:0005524
Trre7g05958 1025 MobiDBLite consensus disorder prediction 1004 1025 - -
Trre7g05958 1025 MobiDBLite consensus disorder prediction 1 109 - -
Trre7g05958 1025 Pfam Ethylene-responsive protein kinase Le-CTR1 148 351 - -
Trre7g05958 1025 SMART serkin_6 743 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05958 1025 Gene3D Transferase(Phosphotransferase) domain 1 821 1024 - -
Trre7g05958 1025 MobiDBLite consensus disorder prediction 677 730 - -
Trre7g05958 1025 ProSiteProfiles Protein kinase domain profile. 743 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05958 1025 Pfam Protein tyrosine and serine/threonine kinase 743 994 IPR001245 GO:0004672|GO:0006468
Trre7g05958 1025 MobiDBLite consensus disorder prediction 8 61 - -
Trre7g05958 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Trre7g05958 1025 MobiDBLite consensus disorder prediction 452 471 - -
Trre7g05958 1025 MobiDBLite consensus disorder prediction 453 471 - -
Trre7g05958 1025 FunFam Serine/threonine-protein kinase CTR1 822 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05958 Trre-Chr7 63965805 63972376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05958 1 1009 MAP Kinase Kinase Kinase AT1G73660 61.748 0.0 1133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trre7g05958 PK_Tyr_Ser-Thr 1e-66 CL0016