Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05956 ATGGGTGGTGGAGGAACGATCGCGGAAGGGATTCGTCGCTTGTTTCAACGAGGACGCTCTTCTAATACTTCTTCAACTTCTTCTAGTAAGCATAATAATAATAATAATAACAATAACAATGATGACCGCGTCTTGGTGAAAGATTTGCGTTCACAGTTGGCCAATATTCCCACCACTACTACCCATCATCATCGATCTCTCTCCAACATCAAAGTCCCCATTTACGCTCCCTTCCCATCTTCTTCTTCTTCTATGGATCCCAACAAAAAGGGTTCGCCTGAAACTGAGTTTTTTACTGAGTATGGAGAGGCAAGTCAATACCAGGTCCAAGAAATCATTGGAAAAGGCAGTTATGGTGTTGTGTGTTCTGCAATTGACATTCATACTGGTGAAAAAGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCAGATGCCACAAGGATCCTAAGAGAAATCAAACTCTTGCGCTTGCTCCGACATCCTGATATTGTGGAAATTAGGCATATTATGCTTCCTCCTTCCCGCCGAGAGTTCAGAGATATCTATGTCGTGTTTGAGTTGATGGAATCTGATCTGCATCAAGTAATTAAGGCAAATGATGATCTCACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTACGAGGCCTCAAATATATACATTCAGCAAATGTGTTTCACCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGATGCCCCATCTGCTATATTCTGGACTGACTATGTTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTACAGGTAGGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATATCATGACTGATTTGCTTGGCACTCCTCCTCCCGAGTCCATTGCGAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAATAGCATGCGAAAAAAGCAACCTGTTCCATTGACCCAGAAATTTCCAAATATAGATCCTTCGGCTCTTCGTATCCTGGAGCGCTTACTTGCATTTGATCCTAAAAACCGTCCATCAGCCGAAGAGGCATTGTCTGATCCTTATTTCCATGGTTTATCAAACATCGATCGCGAACCATCCACTCACCCCATTTCAAAACTTGAGTTTGAATTCGAGAGAAGGAAAGTGACTAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTTGAGGAATATCTTCGTGGTGGAGACCAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGCAAAGGCGAACGAAGCTCACCATTGCAGAGACAACATGCCTCCTTACCTAGAGAGCGAGTTCATACTTCCAAGAATGAAAATAATGAAAACAACGATATTGAAATGTCGACCGGACCAAATCTTCAGAGTCCACGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCAAAGTGTATAGATGTGAAAAGAAGTAAAGATCAAGAGCAGGAACCAATTATGGAGGTCAATGACGACGCAGCAGATGAATTGACAGATAACATTGCTGCCCTGCATGCTTAA 1716 0.4155 MGGGGTIAEGIRRLFQRGRSSNTSSTSSSKHNNNNNNNNNDDRVLVKDLRSQLANIPTTTTHHHRSLSNIKVPIYAPFPSSSSSMDPNKKGSPETEFFTEYGEASQYQVQEIIGKGSYGVVCSAIDIHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDIMTDLLGTPPPESIARIRNEKARRYLNSMRKKQPVPLTQKFPNIDPSALRILERLLAFDPKNRPSAEEALSDPYFHGLSNIDREPSTHPISKLEFEFERRKVTKDDVRELIYREILEYHPQMLEEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSSPLQRQHASLPRERVHTSKNENNENNDIEMSTGPNLQSPRSLLKSASISASKCIDVKRSKDQEQEPIMEVNDDAADELTDNIAALHA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05956 571 CDD STKc_TDY_MAPK 106 443 - -
Trre7g05956 571 FunFam Mitogen-activated protein kinase 422 444 - -
Trre7g05956 571 Gene3D Phosphorylase Kinase; domain 1 122 444 - -
Trre7g05956 571 ProSitePatterns MAP kinase signature. 142 245 IPR003527 GO:0004707|GO:0005524|GO:0006468
Trre7g05956 571 SUPERFAMILY Protein kinase-like (PK-like) 103 403 IPR011009 -
Trre7g05956 571 MobiDBLite consensus disorder prediction 508 532 - -
Trre7g05956 571 ProSitePatterns Protein kinases ATP-binding region signature. 113 137 IPR017441 GO:0005524
Trre7g05956 571 MobiDBLite consensus disorder prediction 16 42 - -
Trre7g05956 571 FunFam Mitogen-activated protein kinase 193 421 - -
Trre7g05956 571 Pfam Protein kinase domain 107 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05956 571 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 106 448 - -
Trre7g05956 571 ProSiteProfiles Protein kinase domain profile. 107 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05956 571 FunFam Mitogen-activated protein kinase 96 201 - -
Trre7g05956 571 MobiDBLite consensus disorder prediction 1 42 - -
Trre7g05956 571 Gene3D Transferase(Phosphotransferase) domain 1 193 421 - -
Trre7g05956 571 MobiDBLite consensus disorder prediction 493 507 - -
Trre7g05956 571 SMART serkin_6 107 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05956 571 MobiDBLite consensus disorder prediction 477 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05956 Trre-Chr7 63932300 63938672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05956 94 571 MAP Kinase Gene Family AT3G18040 79.960 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trre7g05956 Pkinase 2.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05956 - - gmx:100780831 907.901