Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05955 ATGGGTGGTGGAGGAACGATCGCGGAAGGGATTCGTCGCTTGTTTCAACGAGGACGCTCTTCTAATACTTCTTCAACTTCTTCTAGTAAGCATAATAATAATAATAATAACAATAACAATGATGACCGCGTCTTGGTGAAAGATTTGCGTTCACAGTTGGCCAATATTCCCACCACTACTACCCATCATCATCGATCTCTCTCCAACATCAAAGTCCCCATTTACGCTCCCTTCCCATCTTCTTCTTCTTCTATGGATCCCAACAAAAAGGGTTCGCCTGAAACTGAGTTTTTTACTGAGTATGGAGAGGCAAGTCAATACCAGGTCCAAGAAATCATTGGAAAAGGCAGTTATGGTGTTGTGTGTTCTGCAATTGACATTCATACTGGTGAAAAAGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCAGATGCCACAAGGATCCTAAGAGAAATCAAACTCTTGCGCTTGCTCCGACATCCTGATATTGTGGAAATTAGGCATATTATGCTTCCTCCTTCCCGCCGAGAGTTCAGAGATATCTATGTCGTGTTTGAGTTGATGGAATCTGATCTGCATCAAGTAATTAAGGCAAATGATGATCTCACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTACGAGGCCTCAAATATATACATTCAGCAAATGTGTTTCACCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGATGCCCCATCTGCTATATTCTGGACTGACTATGTTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTACAGGTAGGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATATCATGACTGATTTGCTTGGCACTCCTCCTCCCGAGTCCATTGCGAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAATAGCATGCGAAAAAAGCAACCTGTTCCATTGACCCAGAAATTTCCAAATATAGATCCTTCGGCTCTTCGTATCCTGGAGCGCTTACTTGCATTTGATCCTAAAAACCGTCCATCAGCCGAAGAGGCATTGTCTGATCCTTATTTCCATGGTTTATCAAACATCGATCGCGAACCATCCACTCACCCCATTTCAAAACTTGAGTTTGAATTCGAGAGAAGGAAAGTGACTAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTTGAGGAATATCTTCGTGGTGGAGACCAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGCAAAGGCGAACGAAGCTCACCATTGCAGAGACAACATGCCTCCTTACCTAGAGAGCGAGTTCATACTTCCAAGAATGAAAATAATGAAAACAACGATATTGAAATGTCGACCGGACCAAATCTTCAGAGTCCACGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCAAAGTGTATAGATGTGAAAAGAAGTAAAGATCAAGAGGAACCAATTATGGAGGTCAATGACGACGCAGCAGATGAATTGACAGATAACATTGCTGCCCTGCATGCTTAA 1713 0.4151 MGGGGTIAEGIRRLFQRGRSSNTSSTSSSKHNNNNNNNNNDDRVLVKDLRSQLANIPTTTTHHHRSLSNIKVPIYAPFPSSSSSMDPNKKGSPETEFFTEYGEASQYQVQEIIGKGSYGVVCSAIDIHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDIMTDLLGTPPPESIARIRNEKARRYLNSMRKKQPVPLTQKFPNIDPSALRILERLLAFDPKNRPSAEEALSDPYFHGLSNIDREPSTHPISKLEFEFERRKVTKDDVRELIYREILEYHPQMLEEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSSPLQRQHASLPRERVHTSKNENNENNDIEMSTGPNLQSPRSLLKSASISASKCIDVKRSKDQEEPIMEVNDDAADELTDNIAALHA 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05955 570 CDD STKc_TDY_MAPK 106 443 - -
Trre7g05955 570 FunFam Mitogen-activated protein kinase 96 201 - -
Trre7g05955 570 MobiDBLite consensus disorder prediction 508 526 - -
Trre7g05955 570 FunFam Mitogen-activated protein kinase 422 444 - -
Trre7g05955 570 ProSitePatterns MAP kinase signature. 142 245 IPR003527 GO:0004707|GO:0005524|GO:0006468
Trre7g05955 570 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 106 448 - -
Trre7g05955 570 SUPERFAMILY Protein kinase-like (PK-like) 103 403 IPR011009 -
Trre7g05955 570 ProSitePatterns Protein kinases ATP-binding region signature. 113 137 IPR017441 GO:0005524
Trre7g05955 570 MobiDBLite consensus disorder prediction 16 42 - -
Trre7g05955 570 FunFam Mitogen-activated protein kinase 193 421 - -
Trre7g05955 570 ProSiteProfiles Protein kinase domain profile. 107 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05955 570 MobiDBLite consensus disorder prediction 477 526 - -
Trre7g05955 570 Pfam Protein kinase domain 107 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g05955 570 MobiDBLite consensus disorder prediction 1 42 - -
Trre7g05955 570 Gene3D Phosphorylase Kinase; domain 1 122 444 - -
Trre7g05955 570 Gene3D Transferase(Phosphotransferase) domain 1 193 421 - -
Trre7g05955 570 MobiDBLite consensus disorder prediction 493 507 - -
Trre7g05955 570 SMART serkin_6 107 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05955 Trre-Chr7 63932300 63938672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05955 1 569 MAP Kinase Gene Family AT1G73670 68.729 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trre7g05955 Pkinase 2.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05955 - - gmx:100780831 901.353