Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05927 ATGCATCCTAACTCAGTGGTATCGTCTCCTCGTTATCATTATCATAATGAGACTACTGATCTCCCGCATGTGCCTGGTTCCAAACTCCGTCTCTTGTGCAGCTACGGCGGCCACATCATGCCACGTGATAACTCTCTCTACTATGTAGGTGGAGACACTCGCATTGTGGCCGTGGACCGCCATTCATCCTTAACACACCTCTGTGCTCACCTCTCTCGCAATCTCCTTCATGGAAGAAGATCATTCACTCTTAAGTACCATCTTCCCAATGAAGACCTTGACAATCTCATCACTGTTTCAACCGATGAAGACCTCCAAAACATGATCGAAGAGTATGACCGTTTGTCTTCAAACCCTTCCCCCTCCCCTTCTCGACTCAGATTGTTCCTCTTTTTCTCTAAACCAGAAACTGCTGTTTCCATGGACACTCTCCACCATGACTCTAATCATTCGTGGTTCGTGGAAGCTCTCAACAACTCAGGGATTCTCTCTCGAGTTGTTTCTGATTCTGCTGCGGTTGTTGACAATTGCCTCCTCAACCTCGATGATTATGAAGCAAGTGCTTCTAGCTGCAACGACGAAAATACTAATAATAATGTTAACAAGGAGCATTTAATTGATGTGGATTATTCCGTACCTGTGGACGAGGAGGACAACATGTTCAAATATTCATTTGATAATCTTCCTCAAATACGAGTTCGCGCTGATGAACAAAGGCTTGTTGAGATGGAGCAGCAGCAGCAGGATAACAACTTTGACGATGTAAAAGTGGCGAACGTGAAGCAAGATGATGCTTTTCTTGTGCAATCAAAGGTCAAAAGTGATCAAAATCAGCAAGAGGAACAAGTAAACAATTCTACTTACACCTCACCCCAACAACAACCGGATCAAAATCCGCAACAACCTGCAACATATCAACATCAATTTGTCTATATTCACCGTCCTATAGGTACAGGTCAAGTTCCGATATCATCATACTACCCTTATTATGCACCACAATCACACCAACAACTTAATCAGTTCCCAGTTTATGTGATGCCTATTGGACTTGGATCTACACAACCATACAACATGGCTTTGCAATCCAATATAGCTGACACAAATGCAGTAGCCTCAGTTAGGCCACAAAGTGTTGTACCTGAAATGACTACAAGTGTTTATAAAGCTCCTGTGGCATCATCAAATTTTGGTTTTATTCAAATACCTTCCAACCAATTTCAGCAGCAATATATGAATTTGTCTCAAAATATTCATCATCCACCACACCCTATTTATGGTTATGACTATGGTGGAGCTATGCAAGAACAAGTATACTATACACAAACACAACAACAGCATTCAAATGCAAATGCACCCTCTCAGTACCAATCCATGACCCCGGCGGTTGTTGGAGCAGCAATATCAGATGTTCCTATAGATAACATTCAGCAGCCAAACAAAAACTCACAGCAAATATGA 1458 0.4225 MHPNSVVSSPRYHYHNETTDLPHVPGSKLRLLCSYGGHIMPRDNSLYYVGGDTRIVAVDRHSSLTHLCAHLSRNLLHGRRSFTLKYHLPNEDLDNLITVSTDEDLQNMIEEYDRLSSNPSPSPSRLRLFLFFSKPETAVSMDTLHHDSNHSWFVEALNNSGILSRVVSDSAAVVDNCLLNLDDYEASASSCNDENTNNNVNKEHLIDVDYSVPVDEEDNMFKYSFDNLPQIRVRADEQRLVEMEQQQQDNNFDDVKVANVKQDDAFLVQSKVKSDQNQQEEQVNNSTYTSPQQQPDQNPQQPATYQHQFVYIHRPIGTGQVPISSYYPYYAPQSHQQLNQFPVYVMPIGLGSTQPYNMALQSNIADTNAVASVRPQSVVPEMTTSVYKAPVASSNFGFIQIPSNQFQQQYMNLSQNIHHPPHPIYGYDYGGAMQEQVYYTQTQQQHSNANAPSQYQSMTPAVVGAAISDVPIDNIQQPNKNSQQI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05927 485 PANTHER OS05G0427100 PROTEIN-RELATED 2 441 - -
Trre7g05927 485 CDD PB1_UP2 32 131 - -
Trre7g05927 485 MobiDBLite consensus disorder prediction 272 303 - -
Trre7g05927 485 SMART PB1_new 41 133 IPR000270 GO:0005515
Trre7g05927 485 Gene3D - 47 132 - -
Trre7g05927 485 SUPERFAMILY CAD & PB1 domains 43 141 - -
Trre7g05927 485 Pfam PB1 domain 42 131 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05927 Trre-Chr7 63775819 63777276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05927 20 159 MAP Kinase Kinase Kinase AT5G57610 42.759 7.48e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05927 - - tpra:123913553 805.053