Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05900 ATGTTGGGTTCAACTTCTCAAATTTGCATGTCTTCTTCTTCTTCTTCAACTCCAAAGCATGATGTGTTTCTCAGTTTCAGAGGAGAGGATACACGTAACAACTTCATCAGTCATCTTTATGCTGAACTGGATGTTAGACATCAGAGACAGAGTTATGCAGAAGCTTTTGTTAAGCATCAACGTCGATTTAAGGACGATCAACTGGATGCATGGAAGAAATCTCTAACCCAAGTTGCTGGACTCTCTGGCTGGGATTCACAAGTAACCAGACCAGAACAAAAACTTATTGAAGATATTGCGAAAGACATTTTAAGAAAATTGCAACTGAATTGTTCTATTGTAAGTGATTATAAAGGAATGATTGGGATTGACAAACATATTGAACAAATACAATCATTGTTGCACATCGAGTCAGAGGTAGTTCAAATTGTAGAAGGAAGAATTGTGATGCACGATCTAATACAAGAAATGGGACATGAAATTGTTCGTAAACAATGTGTCAATGATCCTGGAAAACGTAGTCGACTGTGGAAGCCTGAGGAAATTTATCAAGTTTTGAAAAAAAACAAGGGGACGGATGCAATCCAGTGTATATTCCTGGACATATGCAAAATAGAAAAGACAGATAAGGAATTACCAAATTTGAAAACACTTGACCTTCGTGGTTCTCAGAACCTTATTCAAATACCAGATCTTGCTCAATGCCCAAATATTGAAGAAGTGATTCTTAGTCATTGCCAAAAACTGGGTCATGTTTATTCTTCTAGTTTCCTCTGCAAGCTTAAATGTTTATGGTTAAATGGTTGTATTAACCTTAGGAGTTTACACATTCCTAGCAATATTCTTCAGATAACTTCTGGATTAATAGTGCTCCATGGTTGTCACAACCTTGAGATGTTTTCAGTCAATCTCTCCAACTGTGAATCCCTCTCGAGCCTTCCAATTGACCTTTTTAAGTTAAAATTTCTAAAAAGACTTTACCTCGGTAGTTGCTTGAATTTGGAGATGTTCCCTGAAATCGAGGAGACTATGGAAAGTATGACTGTGCTCGTGTTAGACAAAACAGCAATCAAGAAACTACCTTCATCCTTGCACCGTTTAGTCAGCCTTGAAGAATTGAGCTTGTACAATTGTCAGAAGCTTGAGACTATTCCATCTTCCATTGGAAGTCTAAGCAAACTCAACAAGTTAAGCATTATGGACTGTGAGTCACTTGAAACTTTTCCGAGCAGTATTTTCAAGTTGAAGTTGACAAAACTTGATTTGCATGGTTGTTCAATGCTAAAGATCTTCCCAGAAATCTTGGAGCAGGCAGAAACCTTTGTTCACATTAACCTAACAAAAACAGCAATTAAGGAACTGCCTACATCTTTGGAATATTTGGTTGGACTTCAAACATTGTGCCTGAAGTTATGCACTGAACTGGTGACACTTCCAAACAGCATTGTTAATCTAAACCATCTATCTGAGCTTGATTGTTCTGGTTGTTGCAGTATTGTGAACCTTCCTGAGAGCATAGCTCACCTCTCAAGCTTGAAATCACTTGTTTTAAGTGATTGCAAAAGGCTTGAATGTATCCCACAACTTCCACCATCTATGAACTACTTGTTTGCTTATGATTGTCCGTCCGTTGGAAGAGTGATGCCAAATTCAAGGTTGGAACTCCCGTCAAATTCCAAAGAGGGTGTATTTGAATTTCATTTCACCAATAGTCAAGAACTGGATGGAAGTGCTCATAATAGTAATATTGCAGCCGAAGCATGGCATAGGATCAGTGAAGTTGCATACAGGGATGTGTTCTTCTGTTTTCCTGGAAGTTCAGTTCCCCATTGGTTCCCTTATCGTTGTCAAGGATGTTCAGTGTCCATGAACAATGATTCTAAAAAATGGTGTTGTGATGATAGCCTCATTGGTTTTGCTTGA 1923 0.3822 MLGSTSQICMSSSSSSTPKHDVFLSFRGEDTRNNFISHLYAELDVRHQRQSYAEAFVKHQRRFKDDQLDAWKKSLTQVAGLSGWDSQVTRPEQKLIEDIAKDILRKLQLNCSIVSDYKGMIGIDKHIEQIQSLLHIESEVVQIVEGRIVMHDLIQEMGHEIVRKQCVNDPGKRSRLWKPEEIYQVLKKNKGTDAIQCIFLDICKIEKTDKELPNLKTLDLRGSQNLIQIPDLAQCPNIEEVILSHCQKLGHVYSSSFLCKLKCLWLNGCINLRSLHIPSNILQITSGLIVLHGCHNLEMFSVNLSNCESLSSLPIDLFKLKFLKRLYLGSCLNLEMFPEIEETMESMTVLVLDKTAIKKLPSSLHRLVSLEELSLYNCQKLETIPSSIGSLSKLNKLSIMDCESLETFPSSIFKLKLTKLDLHGCSMLKIFPEILEQAETFVHINLTKTAIKELPTSLEYLVGLQTLCLKLCTELVTLPNSIVNLNHLSELDCSGCCSIVNLPESIAHLSSLKSLVLSDCKRLECIPQLPPSMNYLFAYDCPSVGRVMPNSRLELPSNSKEGVFEFHFTNSQELDGSAHNSNIAAEAWHRISEVAYRDVFFCFPGSSVPHWFPYRCQGCSVSMNNDSKKWCCDDSLIGFA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05900 640 Gene3D - 12 43 IPR035897 -
Trre7g05900 640 Gene3D - 44 113 IPR035897 -
Trre7g05900 640 Pfam TIR domain 44 118 IPR000157 GO:0007165
Trre7g05900 640 Gene3D Ribonuclease Inhibitor 417 561 IPR032675 -
Trre7g05900 640 SUPERFAMILY L domain-like 194 547 - -
Trre7g05900 640 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 44 IPR035897 -
Trre7g05900 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 136 425 IPR044974 GO:0006952
Trre7g05900 640 Gene3D Ribonuclease Inhibitor 185 416 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05900 Trre-Chr7 63601145 63605746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05900 148 540 WRKY Transcription Factor Family AT4G12020 30.542 3.78e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05900 - - lja:Lj4g3v3113360.1 470.314