Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05897 ATGGAGGTTCTCAAAGATAGGGCCCTTATATCTATTTCGGAAGGTAGAATTGTGATGCATGATCTAATACAGGAAATGGGGCATGAAATTATTCGTCAACAATGTGTCACTGATCCTGGAAAACGAAGTCGACTATGGAAACCTGAGGAAATTTATCAAGTTTTGAAAAAGAATAAGGGGACAGATGCAATCCAATGTAATGAAGAAATGGGGGTTCAATTACACAGTCTTTCGATTTGTAAGTTCAGGAACATTTTTCCTGCGGCAACACCACAAAAGCTATTTTGTTCCCCTTTTGAGAAATTCTCAAATTGTTTTGAACCCCTTGATTGTGTTGAGTTAAATAAAGAACCAAAAGATAATATTCAATTACTAAGCTTAGAAGTGTTGAGAGAAGGGTCACCTTCATTATTTCCAAGTTTGAACGAGCTTTGTTGGTTAGATCTCTCTTATTGTGAATCCCTCTTAAGCCTTCCAACTGAAATCTTCAAGTTAAAATTTCTAAAAAGACTTTACCTCCGTGGTTGCTTTAATTTGGAGAAGTTCGGTGAGATTAAGGAGACTATAGAAAGTTTAGTGGTGCTCATCTTAGATGAAACAGCAATCAAAGAACTACCTTCATCCTTGAACCGTTTGGTTAACCTTGAAGAGTTGAGCTTGCGCTATTGTCAAAAGCTCGAGATTATTCCATCTTCCATTGGAAGTCTTGGCAAACTCAGCAAGTTAGACCTTACCTTCTGTGAATCACTTGAAACTTTTCCGAGCAGTATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGATCTTTCCTGAGATTTTGGAGCCTGCAGAAACTTTTGTTCACATTAACTTAACGCGGACAGCAATTAAGGAATTGCCTTCATCTTTGGAGAATTTGGTTGGGCTTCAAACCTTGTTGCTGAAGTTATGCACTGAGCTCGTGTCAATTCCAAACAGCATTGTTAATCTAAACCATCTATCTGAGCTTGATTGTTCTGGTTGTTGCAGAAGCAGTATTGTGAACCTTCCCAAGAGTATAGCTCATCTCTCAAGCTTGGAATTACTAGATTTAAGTGATTGA 1101 0.3778 MEVLKDRALISISEGRIVMHDLIQEMGHEIIRQQCVTDPGKRSRLWKPEEIYQVLKKNKGTDAIQCNEEMGVQLHSLSICKFRNIFPAATPQKLFCSPFEKFSNCFEPLDCVELNKEPKDNIQLLSLEVLREGSPSLFPSLNELCWLDLSYCESLLSLPTEIFKLKFLKRLYLRGCFNLEKFGEIKETIESLVVLILDETAIKELPSSLNRLVNLEELSLRYCQKLEIIPSSIGSLGKLSKLDLTFCESLETFPSSIFKLKLTKLDLHGCSMLKIFPEILEPAETFVHINLTRTAIKELPSSLENLVGLQTLLLKLCTELVSIPNSIVNLNHLSELDCSGCCRSSIVNLPKSIAHLSSLELLDLSD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05897 366 SUPERFAMILY "Winged helix" DNA-binding domain 2 56 IPR036390 -
Trre7g05897 366 SUPERFAMILY L domain-like 132 366 - -
Trre7g05897 366 Gene3D Ribonuclease Inhibitor 286 366 IPR032675 -
Trre7g05897 366 Gene3D Ribonuclease Inhibitor 126 285 IPR032675 -
Trre7g05897 366 Coils Coil 364 366 - -
Trre7g05897 366 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 184 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05897 Trre-Chr7 63594821 63596863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05897 4 365 WRKY Transcription Factor Family AT4G12020 32.976 1.02e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05897 - - lja:Lj4g3v3113360.1 326.635