Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05895 ATGTTGGGATCAACTTCTTCTGCAATTTTCATGTCTTCTTCTTGTTCTCCAACTCCAAAGCATGAAAAAGCTCTAACCCAAGTAGCTGGATTCTCTGGCTGGGATTCGCAAGAAACCAGACCAGAACATACACTCATTAAAGACATTGTGAAAGATGTTTTAAGAAAATTGAATTTGAATCGTTCTTTCACAGATAAGGAATTACCAAATTTAAAAACACTCGACCTTCGTCATTCTCGGAACCTTATTCAAATACCAGATCTCGCTCACTGCCGAAATATTGAAGAAGTGATTCTTAGTCATTGCCCAAAGTTGGGTGAAGTCTATTCTTCCAGTTTCCTCAGCAAGCTCAAATGTTTATGGCTAAATGGTTGTGTTAGCCTTAGGAGGTTGCACATTCCTAGCAGTATTCTCCAGAGATCTTCTGGATTAATAGTGCTCCATGGTTGTCATAATCTTGAGATGTTTTCAGCCAGTTTAGAAAAAAATGTTTTTAGAAACATTGTTCCAGTGGAAAAACACAGTGGCAAGAAATTCGAGTCCTTTTTTTGGAAATGCTCCCACGAAAAAAAAGCAAAGGATTGCAATGTCAGAGTAGTTACTTTTGACTCCCTGGATTATGCTGAGTTAAACAAAGAACCAAATGATAATATACAATTACTAAACTTTGCATTGTTGAGAGAAGGTTCGCCCACATTATTTCCAAGTCTAAATGATCTTTGTTGGTTAGATCTCTCCAACTGTGAATCCCTCTTGAGCCTTCCAATTGACCTTTTTAAGATGACATTTCTAAGAAGACTTTATCTCAGTCGTTGCTTTAATTTAGAGAATTTCCCTGAAATCGAAGCGACTATGGAAAGTTTAGAGGTGCTCATGTTAAACGAAACAGCAATCAAGGAACTACCTTCATCCTTGCACCGTTTGGTCAACCTTGAAGAGTTGAGTTTGCACAATTGCCAGTTGCTTGAGACTATTCCTTCTTCGATTGGAAGTCTAAGCAAACTCAACAAGTTAAACCTTACCTGTTGTGAATCACTTGAAACTTTTCCAAGTAGTATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTTAATGCTGAAGACCTTTCCAGAGATCTTGGAACGTGCAGAAACCTTTGTTCATATAAACTTAACAAAAACAGCAATTACGGAATTGCCTTCATCTTTGGAGTATTTGGTTGGGCTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGTATTGTTAATCTAAACTATCTATCTGAGCTTGACTGTTCTGGCTGTCGCAGTTTAACAGAAATCCCAAATAACATTGGCAGCTTGTCATCATTGAGGGAACTTTCACTTCAAGAAAGCAACATTGTGAGCCTTCCCGAGAGCATAGCTCATCTTTCAAGTTTAAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCGCCATCTCTAAACCAGTTGTTGGCGTATGATTGCCCGTATGTTGGAAGAATGATACCAAATTCAAGGTTGGAACTCCCGTCAAATTCCAACAAGAATACCTTCGAATTTCATATCACCAATAGTCAACAACTGGATGAAACTGCTCGCAGTAATATTGGGGCTGAAGCAAGGCTTAGGATCACCGAGAATGCATATAGGTCTGTGTTCTTTTGTTTTCCTGGGAGTGCAGTTCCTCGTTGGTTCCCTTGTCGTTGTAAGGGACGTTTGGTAACCATGAAAAAAGATTCTCAAGATTGGTCTGCTAATAATAGGCTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGTTGTGTGGAAGATAGTCTTACATACAGATTAGCATATGAGTCTGATAGTCGCACACACATTCTTCCTAACCATGACCAAATACAAAACTATTTCTATTGGAAAGGTCGAAAAAGGTTAGTCGTCCAAGATCACACATTCATATGGAAATATTATTTGGACTTTGGAAGAATTGACAACAGCTTCTTTGATGCTCACAACTTCACTTTTGAGTTGAGAAAATCAAGTGTTGTGGTAAAAGAGTGTGGAATATGTCCTCTTTATACAAAAGAAAAGGATGATAACTGTGCTGGACTCATTGGCTGGGACTCACGAGTAACCAGACCAGAACACAAACTTGTTGAAGACATTGAAATGGGACGGGAAATTGTTCGTCAAGAATGTGTCAATGATCTTGGAAGAAAATGCAGTCGACTATGGAAGCATGAGGAAATTTATGAAGTTTTGACAGACAAGAAGGGGACGGATGCAATCCAATGCTTTCGCCCCAAAAATCTTGTTAAACTGTATATGCCTCATAGCCGTCTTGAAAAACTTTGGCTGGAAGATAAGGATTTACCAAATCTGAAAACACTTGACCTTAGTGGTTCACAGAACCTGATTCAAATACCAGACCTTGCTCGATGCCCAAATATTGAAGAAGTAATTCTTAGTCATTGCAGAATGTTGGGTGAAGTTTATTCTTCCAGTTTCTTGTGCGAGCTCAAATGTTTATGGTTAAATGGTTGTATTAGCCTCAGGAGTTTACATATTCCTAGCAGTATTCTGCAGAGAACTTCTGGATTAATAGTGGTCTATGGTTGTAGCAGCCTTGAGATGTTTTCAGTTGGTAATGAAAAAATGAGGATTCAACGTTCTGCACCATATTATTCTAAACAAAGGTTACATTCACTATCTCAACAGCAACATTTGTTAGTTAAGAAATTCTCAATTACTTTTGAACCCCTAGATTGTGTTGAGTTATATAAAGAACCAAAAAATAATGAAGAATTACTAAACTTAGAAGTGTTGAGAGAAGGGTCACCTTCATTACTTCCAAATCTTAACGAGCTTTGTTGGTTAGATCTCTCTTTTTGTGTATCCCTCTTGAGCCTACCAACTGAAATCTTCAAGTTAAAATTTCTAAAAAGACTTTACCTCCGTGGTTGCTATAATTTGGAGAAGTTCGGTGAGATTAACGAGACTATAGAAAGTTTATTGGTGCTCATCTTAGACCAAACAGCGATCAAGGAACTTCCTTCATCCTTGCACCATTTGGTTGGACTTGAAGAGTTGAGCTTGCGCTATTGTCAAAAGCTCGAGATTATTCCATCTTCCATTGGAAGTCTTGGCAAACTCAGCAAGTTAGACCTTACCTTCTGTGAATCACTTGAAACTTTGCCGATCAGTATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGACCTTTCCAGAAATCTTGGAGCCTGCAGAAACTTTTGTTCACATTAACTTAACAAAAACAGCAGTTACGGAACTGCCTTCATCCTTGGAGTATTTGGTTGGACTTCAAACCTTGTGCCTGAGGTTATGCAGTGATCTGGTGTCACTTCCAAACAGCATTGTTAATCTAAAATTTCTATCCGAGCTTGATTGTTCTGGCTGTCGCAGTTTAACAGAAATCCCAAATAACATTGGTAGTTTGTCATTATTGAGGGAACTTTCACTTCAAGAAAGCAACATTGTGAGCCTTCCCGAGAGCATAGCTCATCTTTCAAGTTTAAAATCACTTGATTTAAGTGATTGCAAAAAGCTTGAATGTATCCCACAACTTCCGCCATCTCTAAACCAGTTGTTGGCGTATGATTGCCCGTATGTTGGAAGAATGATACCAAATTCAAGGTTGGAACTCCCGTCAAATTCCAACAAGAATACCTTCGAATTTCATATCACCAATAGTCAACAACTGGATGAAACTGCTCGCAGTAATATTGGGGCTGAAGCAAGGCTTAGGATCACCGAGAATGCATATAGGTCTGTGTTCTTTTGTTTTCCTGGGAGTGCAGTTCCTCGCTGGTTCCCTTGTCGTTGTAAGGGACGTTTGGTAACCATGAAAAAAGATTCTCAAGATTGGCCAAGTGATAATAGGCTTGTTGGTTTTGCTCTGAGTGTCGTTTTGGGACATATTGATATGGATGATGATAGAATACCAATTCGTAGTAGCTTTAGATACAGATTAACATTTGAATCTGATGGCTGCACACACATTCTTCCTAATAATGACAAAATAAAATACTATTTCTATTCGAAGGGCCGAAGTAGGTCAGTTGTTCAAGACCACACATTCATATGGAAATATCACTTGGACTTGGCTAGCATTGACAACATGCTCTCTGATGCCCACAACTTCACTTTTGAGTTTAGCGAACACGACTATCTCTCATACTCAAAATCAAATGTCATGAATGACATTGAAGAACCAAGTGGAAGCAGTGTTGCATAA 4305 0.3861 MLGSTSSAIFMSSSCSPTPKHEKALTQVAGFSGWDSQETRPEHTLIKDIVKDVLRKLNLNRSFTDKELPNLKTLDLRHSRNLIQIPDLAHCRNIEEVILSHCPKLGEVYSSSFLSKLKCLWLNGCVSLRRLHIPSSILQRSSGLIVLHGCHNLEMFSASLEKNVFRNIVPVEKHSGKKFESFFWKCSHEKKAKDCNVRVVTFDSLDYAELNKEPNDNIQLLNFALLREGSPTLFPSLNDLCWLDLSNCESLLSLPIDLFKMTFLRRLYLSRCFNLENFPEIEATMESLEVLMLNETAIKELPSSLHRLVNLEELSLHNCQLLETIPSSIGSLSKLNKLNLTCCESLETFPSSIFKLKLTKLDLHGCLMLKTFPEILERAETFVHINLTKTAITELPSSLEYLVGLQTLCLKLCSDLVSLPNSIVNLNYLSELDCSGCRSLTEIPNNIGSLSSLRELSLQESNIVSLPESIAHLSSLKSLDLSDCKKLECIPQLPPSLNQLLAYDCPYVGRMIPNSRLELPSNSNKNTFEFHITNSQQLDETARSNIGAEARLRITENAYRSVFFCFPGSAVPRWFPCRCKGRLVTMKKDSQDWSANNRLVGFALSVVLGCVEDSLTYRLAYESDSRTHILPNHDQIQNYFYWKGRKRLVVQDHTFIWKYYLDFGRIDNSFFDAHNFTFELRKSSVVVKECGICPLYTKEKDDNCAGLIGWDSRVTRPEHKLVEDIEMGREIVRQECVNDLGRKCSRLWKHEEIYEVLTDKKGTDAIQCFRPKNLVKLYMPHSRLEKLWLEDKDLPNLKTLDLSGSQNLIQIPDLARCPNIEEVILSHCRMLGEVYSSSFLCELKCLWLNGCISLRSLHIPSSILQRTSGLIVVYGCSSLEMFSVGNEKMRIQRSAPYYSKQRLHSLSQQQHLLVKKFSITFEPLDCVELYKEPKNNEELLNLEVLREGSPSLLPNLNELCWLDLSFCVSLLSLPTEIFKLKFLKRLYLRGCYNLEKFGEINETIESLLVLILDQTAIKELPSSLHHLVGLEELSLRYCQKLEIIPSSIGSLGKLSKLDLTFCESLETLPISIFKLKLTKLDLHGCSMLKTFPEILEPAETFVHINLTKTAVTELPSSLEYLVGLQTLCLRLCSDLVSLPNSIVNLKFLSELDCSGCRSLTEIPNNIGSLSLLRELSLQESNIVSLPESIAHLSSLKSLDLSDCKKLECIPQLPPSLNQLLAYDCPYVGRMIPNSRLELPSNSNKNTFEFHITNSQQLDETARSNIGAEARLRITENAYRSVFFCFPGSAVPRWFPCRCKGRLVTMKKDSQDWPSDNRLVGFALSVVLGHIDMDDDRIPIRSSFRYRLTFESDGCTHILPNNDKIKYYFYSKGRSRSVVQDHTFIWKYHLDLASIDNMLSDAHNFTFEFSEHDYLSYSKSNVMNDIEEPSGSSVA 1434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05895 1434 Gene3D Ribonuclease Inhibitor 743 895 IPR032675 -
Trre7g05895 1434 Gene3D Ribonuclease Inhibitor 1077 1226 IPR032675 -
Trre7g05895 1434 Gene3D Ribonuclease Inhibitor 362 508 IPR032675 -
Trre7g05895 1434 Gene3D Ribonuclease Inhibitor 58 193 IPR032675 -
Trre7g05895 1434 SUPERFAMILY L domain-like 756 999 - -
Trre7g05895 1434 Gene3D - 13 57 IPR035897 -
Trre7g05895 1434 Pfam C-JID domain 566 699 IPR045344 -
Trre7g05895 1434 SMART LRR_CC_2 473 503 IPR006553 -
Trre7g05895 1434 SMART LRR_CC_2 91 119 IPR006553 -
Trre7g05895 1434 SMART LRR_CC_2 1192 1222 IPR006553 -
Trre7g05895 1434 SMART LRR_CC_2 308 335 IPR006553 -
Trre7g05895 1434 SMART LRR_CC_2 817 845 IPR006553 -
Trre7g05895 1434 SMART LRR_CC_2 980 1010 IPR006553 -
Trre7g05895 1434 SMART LRR_CC_2 1027 1054 IPR006553 -
Trre7g05895 1434 SMART LRR_CC_2 261 291 IPR006553 -
Trre7g05895 1434 SMART LRR_typ_2 794 818 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 1169 1191 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 450 472 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 1004 1026 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 1192 1219 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 473 500 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 308 332 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 1051 1075 IPR003591 -
Trre7g05895 1434 SMART LRR_typ_2 285 307 IPR003591 -
Trre7g05895 1434 Gene3D Ribonuclease Inhibitor 934 1076 IPR032675 -
Trre7g05895 1434 Gene3D Ribonuclease Inhibitor 195 361 IPR032675 -
Trre7g05895 1434 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 1105 1238 - -
Trre7g05895 1434 SUPERFAMILY L domain-like 930 1241 - -
Trre7g05895 1434 SUPERFAMILY L domain-like 61 152 - -
Trre7g05895 1434 Pfam Leucine Rich Repeat 773 791 IPR011713 -
Trre7g05895 1434 SUPERFAMILY L domain-like 226 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05895 Trre-Chr7 63572661 63591556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05895 331 539 WRKY Transcription Factor Family AT4G12020 28.879 2.50e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05895 - - lja:Lj4g3v3113360.1 758.059