Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05894 ATGGCTGGTGGCGATGAACACAGACTAAGCCTTGAACCTGAGAAACAGAGCCTTCTCAATCGCCACACCGAAAAACACTTCACCGCCGGCGAAATCGTCCGTGACATTATCATCGGCGTCTCCGACGGACTCACCGTCCCGTTCGCCCTCGCCGCCGGTCTCTCCGGCGCCAATGCAACTTCTTCCATCGTCCTGACTGCCGGAATCGCAGAAGTCGCCGCCGGTGCAATATCGATGGGTTTAGGCGGTTATTTAGCAGCAAAAGGTGAAGCTGATCATTACAATAGAGAATTGAAAAGAGAACAAGAAGAAATCATCACAGTACCAGAGACTGAAGCGGCTGAGGTGGCGGAGATATTGGCGGAGTATGGAATAGAGGAACATGAATATGGACCGGTGGTGAATGCTCTGAGAAAGAATCCACAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTGGAGAAGCCAGATCCAAGGAGAGCATTGTATAGTGCAATGACAATTGCCATTGCTTATGTATTGGGTGGAGTTGTTCCTCTCATTCCTTACATGTTCATTCCAAATGCAGCAGAAGCTGTTCTGTTTTCAGTAGTTGTTACATTGATTGCATTGCTTATATTTGGCTTTGTCAAGGGATGCTTCACCGGCAACAAACCTATCAGAAGTGCTTTCGAAACTGCTTTAATTGGTGCCATTGCCTCTGCGGCTGCTTATGGTTTGGCAAAGGCTTTCCATTCCTAG 747 0.4793 MAGGDEHRLSLEPEKQSLLNRHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKGEADHYNRELKREQEEIITVPETEAAEVAEILAEYGIEEHEYGPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALYSAMTIAIAYVLGGVVPLIPYMFIPNAAEAVLFSVVVTLIALLIFGFVKGCFTGNKPIRSAFETALIGAIASAAAYGLAKAFHS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05894 248 Coils Coil 84 104 - -
Trre7g05894 248 Pfam VIT family 33 243 IPR008217 GO:0005384|GO:0030026
Trre7g05894 248 CDD CCC1 12 246 - -
Trre7g05894 248 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 246 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05894 Trre-Chr7 63568606 63570783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05894 5 248 Nodulin-like Gene Family AT3G43660 24.797 3.88e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05894 K22736 - gmx:100793585 404.06