Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05892 ATGGTGTCAAGATCTTATTCAAATCTACTAGAGCTAGCCTCTGGTGAGTATCCAACGTTTGAAAACATGAACAGGAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTGATGTTGATGATGACCCTTTGGAGAGTGTGTGTTCTGACCCTTCTTCTTCATCAGTCCAAAGAGAAAGGATCATAATAGTGGCAAACCAGCTTCCTATAAAGGCTCAGAGGAAGCAAGATGGTAATAACAAAAATAATTGGTTTTTCAGCTGGGATGAGAATTCACTTCTACTTCAACTCAAAGATGGGTTAGGAGATGATGATATTGATGTTATTTATGTTGGTTGCCTCAAGGAAGATGTTCATCCAAATGAACAAGACGAGGTTTCACAGATACTACTTGAGACCTTTAAATGTGTCCCTACTTTTCTTCCAGGTGATCTTTTTACAAGGTATTATCATGGCTTTTGTAAGCAACAGTTATGGCCACTGTTCCATTACATGTTGCCTCTGTCACCAGACCTTGGTGGGAGGTTCAATAGGTCACTGTGGCAAGCTTATGTATCAGTCAATAAGATATTTGCTGATAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTTTGGATACATGATTATCATCTCATGGTTTTACCAACTTTCTTGAGAAAAAGGTTTAATAGAGTGAAACTGGGATTTTTTCTCCATAGTCCTTTCCCTTCATCAGAAATTTACAAGACATTGCCTATTAGGGAAGAACTTTTGAGAGCCCTTTTGAATTCTGATTTGATTGGTTTCCACACTTTTGATTATGCAAGACATTTCCTCTCATGTTGTAGTAGGATGCTTGGTCTTACCTATGAATCCAAAAGAGGTTATATTGGGATTGAGTATTATGGTAGGACCGTAAGTATCAAAATTCTTCCTGTTGGCATACACATGGGCCAGCTTCAATCAGTTCTAGGCCTACCAAAGACTGAAGAGAAAGTATCTGAGCTCATTGGACAGTTTTCTGATAAAGGAAAGATAATGTTACTTGGTGTGGATGACATGGATATCTTTAAAGGGATAAGTTTGAAGCTATTGGCCATGGAACAGCTTCTTATTCAGCACCCTGAGTGGCATGGAAAGGTTGTATTGGTTCAGATAGCCAATCCTGCAAGAGGGAAAGGGAAGGATGTGAAGGAAGTGCAAGCAGAGACGAAGGCGACCGCAAAACGGGTTAATGAAAGATTTGGTAAACCTGGTTATGATCCTGTCATTCTGATTGAGGAGCCATTAAGATTTTATGAAAAAGTTGCATACTATGTTGTAGCTGAATGTTGTCTAGTGACTGCAGTTAGGGATGGAATGAATCTCATACCTTATGAATATATAATCAGTCGTCAAGGAACTGAAAAATTGGACCAACTTTTGGGAATAGGTTCATCCCTTAAGAAAAGCATGTTGGTTGTGTCTGAATTTATTGGTTGTTCTCCATCTTTAAGTGGAGCTATCAGAGTGAATCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCAGCTTTGGAAATGGCTGATTCAGAGAAACAGCTCAGGCATGAGAAGCATTACAAATATGTTAGTACTCATGATGTCGGTTACTGGGCTCGTAGCTTCTTGCAAGATTTAGAAAGGACTTGTAGCGATCATGTAAGACGAAGGTGGTGGGGAATTGGTTTCGGATTAAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAAGAAGCTCTCAATGGAGCACATTGTTTCTGCTTACAAGCGGACAAAAACTAGGGCTATCCTTCTAGATTATGATGGTACACTAATGCCCCAGGCTTCAATTGATAAGAGCCCAACCAGTAATTCCATTAAAATGCTTAATAGTTTGTGTAGAGATGAGAACAACATGGTGTTTCTAGTCAGTGCTAAAAGCCGTAAGACGCTTGCTGAATGGTTTTCTCCTTGTGAAAATTTGGGAATTGCTGCCGAGCATGGTTACTTTTTAAGACTGAAGCGGGATGCAGAATGGGAAACATGCGCTCCTGTAACAGACACCAGTTGGAAATTAATTGCTGAGCCTGTAATGAAGCTTTACACTGAAACAACAGATGGATCAACAATAGAAGATAAGGAAACAGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGATTTTGGATCATGCCAAGCTAAAGAACTTCTTAATCATCTTGAAAGTGTGCTTACAAATGAACCGGTAACAGTGAAGAGTGGCCTGAATAACGTGGAGGTTAAACCACAGGGTGTGAACAAGGGGATTGTGGCTAAACGCCTACTTTCAGCCATGCAAGGAAAGGGAATGTCACCTGATTTTGTTTTGTGTATAGGCGACGACCGATCTGATGAAGATATGTTTGAGGTAATCACCAGTTCCGTCCCTTCCATGGCACCCAGGGCTGAAGTATTTGCATGCACAGTTGGTCGAAAACCCAGTAAGGCCAAGTATTATCTGGATGATACTACTGATATAGTGAGAATGGTGCAGGGTTTAGCCTGTGTTTCAGACCAAATAGTTTTATGTTAG 2562 0.4024 MVSRSYSNLLELASGEYPTFENMNRRIPRIMTVAGLISDVDDDPLESVCSDPSSSSVQRERIIIVANQLPIKAQRKQDGNNKNNWFFSWDENSLLLQLKDGLGDDDIDVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPGDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLGLPKTEEKVSELIGQFSDKGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWHGKVVLVQIANPARGKGKDVKEVQAETKATAKRVNERFGKPGYDPVILIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTEKLDQLLGIGSSLKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYKYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTKTRAILLDYDGTLMPQASIDKSPTSNSIKMLNSLCRDENNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFLRLKRDAEWETCAPVTDTSWKLIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLNHLESVLTNEPVTVKSGLNNVEVKPQGVNKGIVAKRLLSAMQGKGMSPDFVLCIGDDRSDEDMFEVITSSVPSMAPRAEVFACTVGRKPSKAKYYLDDTTDIVRMVQGLACVSDQIVLC 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05892 853 Pfam Trehalose-phosphatase 601 833 IPR003337 GO:0003824|GO:0005992
Trre7g05892 853 FunFam Alpha,alpha-trehalose-phosphate synthase 319 535 - -
Trre7g05892 853 Gene3D Glycogen Phosphorylase B; 326 536 - -
Trre7g05892 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 597 714 - -
Trre7g05892 853 Pfam Glycosyltransferase family 20 61 551 IPR001830 GO:0003824|GO:0005992
Trre7g05892 853 NCBIfam trehalose-phosphatase 596 843 IPR003337 GO:0003824|GO:0005992
Trre7g05892 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 844 IPR001830 GO:0003824|GO:0005992
Trre7g05892 853 Gene3D Glycogen Phosphorylase B; 51 325 - -
Trre7g05892 853 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 317 - -
Trre7g05892 853 CDD GT20_TPS 61 551 IPR001830 GO:0003824|GO:0005992
Trre7g05892 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 554 - -
Trre7g05892 853 CDD HAD_TPP 599 838 - -
Trre7g05892 853 Gene3D - 597 729 IPR023214 -
Trre7g05892 853 Gene3D - 730 851 IPR023214 -
Trre7g05892 853 SUPERFAMILY HAD-like 598 843 IPR036412 -
Trre7g05892 853 FunFam Trehalose-6-phosphate synthase 10 728 852 - -
Trre7g05892 853 FunFam Trehalose-6-phosphate synthase 2 681 760 - -
Trre7g05892 853 NCBIfam HAD-IIB family hydrolase 600 801 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05892 Trre-Chr7 63552453 63555884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05892 1 851 Trehalose Biosynthesis Gene Families AT1G68020 80.116 0.0 1449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05892 K16055 - cit:102609352 1503.03