Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05838 ATGAGAACCCAACGCTCTCACCATTTCCTCCTATTATCCATCCTCTTCTTCGCATCAACATTCTCATTTCTCCGATTAGCAACCTCCACCGGAGCAGAACCTCCGACCACCGGCAACAACGACGCCGAATACATCCGTTCAAGTTGCAACGCAACACTATACCCTGACATATGCTACACTTCCCTCTCTCGTTACGCCAATGCAGTTCAACAGAATCCAGGCCAACTCGCTCGCATCGCTATAGCCGTAAGTTTCTCCAAGGTTCACCGTACCGCATCATACCTCTCAAATCTCACTCGCGTCGCAGATTACAGCGGTAACTCACGCGCCGCACTCGCTCTTCATGATTGTTTCTCAAATCTCGACGACGCCGTTGATGAAATCCGTGGCTCGCTTAAACAGATGCGTCAGTTAGGAGCCGCCGGAAGTGGAACTGATTCGTTTCTTTTTCAGATGAGTAACGTCCAGACGTGGATGAGTGCGGCGCTTACCGATGAAGAAACGTGTACGGATGGATTTCAAGATGTAGAGGATTGTCCGATGAAAGCGGATGTAGAGAATCGTGTGACGAAGGTGAAGAAGTTCACGAGTAATGCTTTGGCACTTGTTAATGGTTACGCCAAAAAAGGAATGCCGTGA 639 0.4914 MRTQRSHHFLLLSILFFASTFSFLRLATSTGAEPPTTGNNDAEYIRSSCNATLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYSGNSRAALALHDCFSNLDDAVDEIRGSLKQMRQLGAAGSGTDSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPMKADVENRVTKVKKFTSNALALVNGYAKKGMP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05838 212 NCBIfam pectinesterase inhibitor domain 13 206 IPR006501 GO:0004857
Trre7g05838 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 204 IPR035513 -
Trre7g05838 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 206 IPR035513 -
Trre7g05838 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 202 - -
Trre7g05838 212 CDD PMEI-like_3 47 208 - -
Trre7g05838 212 SMART PMEI_2 40 202 IPR006501 GO:0004857
Trre7g05838 212 Pfam Plant invertase/pectin methylesterase inhibitor 44 202 IPR006501 GO:0004857
Trre7g05838 212 FunFam Pectin methylesterase inhibitor 1 40 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05838 Trre-Chr7 63226863 63227501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05838 10 212 Carbohydrate Esterase AT5G53370 28.019 7.46e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05838 - - cam:101503417 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05838 7 63226863 63227501 Trre7g05838 7 63226863 63227501 ECH