Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05832 ATGGCTGCTAAACGATTTTTGTTTGATTCTAATCAAGACAAAGACAAACAAAATGACAATAAACGAATGAGAACTGCATCAACATCTTCTTTTGCTTCCGTGATAGGAGAAGTGCTTATGGTGAAAAACATGCAAAGCCTTTTCTCAGGCTTGGAACCATTACTTAGAAGAGTGGTGAACGAAGAGGTGGAACGAGCAATGAGACAATGTTATCCACCACGATCAATAACAAAATCATCTTCATTGAGACTCAAAGCAATGGAAGAACCATCGAGTTTTGAATTCGTATTCAAAAAGAAACTTTCACTTCCAATATTCACAGGTAGTAAAATAGTAGACATGGATGGAAACTCAATCAATGTGATTCTTGTTGATAAAAGCAATGGCCAAAAAGTCCCTACAAGTCTACCTCACCCAATCAAGATTGAAATTGTAGTTCTTGATGGAGATTTTCCACCAAGTGAAAAGGAATCATCATGGACTAGTGAAGAATTCAATAGTAATATTGTGAAAGAGAGAACTGGGAAGAGACCATTGCTTACAGGAGAATTGAATCTTACCATGAGAGATGGAATTGCACCAATTGGAGATATTGAGTTCACCGATAATTCAAGCTGGATTCGTAGTAGAAAGTTTAGAGTTGCTGTTAGAATTGCGCCCGGGACTAACCAAAGTGTCCGAATCCGTGAAGGCATGACCGAACCTTTTGTTGTTAAGGATCACCGCGGCGAATTGTACAAGAAACACCACCCACCAAATCTAAAAGATGAAGTGTGGAGGCTAGAGAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGAGCAAAGAAGGAATCACTACTGTACAAGAGTTTCTCAAATTATCTGTTGTTGACCCTCTTAGGCTAAGAAAGATTTTAGGCATGGGAATGTCAGAGAAAATGTGGGAAGTGACAATTAAGCATGCAAAGACTTGTGTAATGGGAAACAAATTCTATGTCTACCGTGGTCCACAATTTACCATATATCTCAATGCTATATGCCAAATGGTTAAGGCTTATGTCAATGGTCAAATTATTCCCAACCGAGACATGTCCAACATGAACAGGGGATACATAGAAGAAGCATATGCTAGATGGAATGAGTTGGAAGAAATTGATGAAATTTTGAATGACAACGTTGCTTTGTTAACTCAAGGTGAAACTGTGGAACAATTTCAAAACAATAATAATCATCAAGCACCGGTTATAGCATATGATCAAAATGACTTTTTTGGTGATAAATCTCTAGAGGGTGGAAACTATGTAGCAAGTCATAATAATAATGCACAAATAGGTTGCATCCAATGGTCACAACCACATGCCACGTCACCATTCATGAATGGAATATTATCTTATAGCTTCTCAGATTTACAACCAGAAGGTGTTGATATAATGCCTTCAACTTCAAGGTGGCATTAG 1440 0.3778 MAAKRFLFDSNQDKDKQNDNKRMRTASTSSFASVIGEVLMVKNMQSLFSGLEPLLRRVVNEEVERAMRQCYPPRSITKSSSLRLKAMEEPSSFEFVFKKKLSLPIFTGSKIVDMDGNSINVILVDKSNGQKVPTSLPHPIKIEIVVLDGDFPPSEKESSWTSEEFNSNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQSVRIREGMTEPFVVKDHRGELYKKHHPPNLKDEVWRLEKIGKDGAFHKKLSKEGITTVQEFLKLSVVDPLRLRKILGMGMSEKMWEVTIKHAKTCVMGNKFYVYRGPQFTIYLNAICQMVKAYVNGQIIPNRDMSNMNRGYIEEAYARWNELEEIDEILNDNVALLTQGETVEQFQNNNNHQAPVIAYDQNDFFGDKSLEGGNYVASHNNNAQIGCIQWSQPHATSPFMNGILSYSFSDLQPEGVDIMPSTSRWH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05832 479 Pfam Calmodulin binding protein C-terminal domain 324 379 IPR046829 -
Trre7g05832 479 MobiDBLite consensus disorder prediction 1 26 - -
Trre7g05832 479 MobiDBLite consensus disorder prediction 8 22 - -
Trre7g05832 479 Pfam Calmodulin binding protein central domain 254 319 IPR046830 -
Trre7g05832 479 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Trre7g05832 479 PANTHER OS02G0177800 PROTEIN 16 435 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05832 Trre-Chr7 63151494 63154140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05832 11 380 Calmodulin-binding Proteins AT5G57580 47.757 2.69e-113 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05832 - - gmx:100802257 644.81