Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05830 ATGGCTGCAAAACGTTTTTTGGATGATTCTAATCAAGACAAAGATAAACCAAATGATAAACGGATTAGAACTACTACTTCTTTTGCTTCGGTAATAGGAGAAGTGGTTATGGTGAAAAACATGCAAAACCTGTTCTCTGGCTTGGAACCATTACTTAGAAGAGTGGTGAACGAAGAAGTGGAACGAGCAATAGGACAATGTTATCCACCGCGATCAATAACAAAGTCATCTTCATTGAGACTCAAAGCAGTTGAAGAACCATTAAGTTTTGAATTTGTATTCAAAAAGAAACTTTCACTTCCAATATTCACAGGTAGTAAAATACTAGACATGGATGGAAACTCAATCAATGTGATTCTTGTTGACAAAAGTAATGGCCAAGAAGTCCCAACAAGTCTACCTCACCCAATCAAGATTGAAATTGTAGTTCTTGATGGAGATTTTCCACCAAGTGAAAAGGAATCATCATGGACTAGTGAAGAATTCAATAGTAATATTGTGAAAGAGAGAACTGGGAAGAGGCCATTGCTTACAGGAGAATTGAATCTTACTATGAGAGATGGAATTGCACCAATTGGAGATATTGAGTTCACCGATAATTCTAGCTGGATTCGTAGTAGAAAGTTTAGAGTTGCTGTTAGAATTGCGCCTGGGACTAATCAAAGTGTCCGAATTCGTGAAGGCATGACCGAACCTTTTGTTGTTAAAGATCATCGTGGTGAATTGTACAAGAAACACCATCCACCAAATCTAAAGGACGAAGTGTGGAGGCTAGAGAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGACCAAAGAAGGAATTACTAATGTACAAGAGTTTCTCAAGTTATCTGTTGTTGAACCTCAAAGACTCAGAAAGATTTTAGGAATTGGGATGTCAGAAAAAATGTGGGAAGTGACAATTAAGCATGCAAATACTTGTGTAATGGGAAACAAACTATATGTCTACCGTGTTCCTCAAGTTACCATATATCTCAATGCCATATGCCAAATGGTTAAAGCTTATGTCAACGGTCAAATTATTCCCAACCGAGACATGCCCAACATGAACAAGGGATACATAGAAAAATTGGTGAAAGAAGCATATGCTAGATGGAATGAGTTGGAGGAAATTGATGAAGTTTTGAATGATAACGTTGCTTTGTTAACTCAAGGTGAAACAGTGGAACAATTTCAAAACAATAATAATCATCAAGCACCGATTATAGCATATGATCAAAATGACTTTTTTGGTGATAAATCTCTAGAGGGTGGAAACTATGTAGCAAGCCATAATAATAATGCACAAATAGGTAGCACCCAGTGGTCACCACCATTTCCCACTTCACCATTCATGAATGCCATATCTTATAGCTTCACAGATTCACAATCAGATGATGGTGATATAACCCCTTCAACTTCAGGACCAGTTATTGATGGAGCTTCAAGGTGGCTTTAA 1464 0.373 MAAKRFLDDSNQDKDKPNDKRIRTTTSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAIGQCYPPRSITKSSSLRLKAVEEPLSFEFVFKKKLSLPIFTGSKILDMDGNSINVILVDKSNGQEVPTSLPHPIKIEIVVLDGDFPPSEKESSWTSEEFNSNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQSVRIREGMTEPFVVKDHRGELYKKHHPPNLKDEVWRLEKIGKDGAFHKKLTKEGITNVQEFLKLSVVEPQRLRKILGIGMSEKMWEVTIKHANTCVMGNKLYVYRVPQVTIYLNAICQMVKAYVNGQIIPNRDMPNMNKGYIEKLVKEAYARWNELEEIDEVLNDNVALLTQGETVEQFQNNNNHQAPIIAYDQNDFFGDKSLEGGNYVASHNNNAQIGSTQWSPPFPTSPFMNAISYSFTDSQSDDGDITPSTSGPVIDGASRWL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05830 487 MobiDBLite consensus disorder prediction 464 487 - -
Trre7g05830 487 MobiDBLite consensus disorder prediction 1 20 - -
Trre7g05830 487 Pfam Calmodulin binding protein C-terminal domain 321 380 IPR046829 -
Trre7g05830 487 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
Trre7g05830 487 Pfam Calmodulin binding protein central domain 251 316 IPR046830 -
Trre7g05830 487 PANTHER OS02G0177800 PROTEIN 1 449 IPR012416 GO:0005516
Trre7g05830 487 MobiDBLite consensus disorder prediction 464 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05830 Trre-Chr7 63143672 63146357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05830 3 381 Calmodulin-binding Proteins AT5G57580 49.219 6.53e-119 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05830 - - gmx:100802257 664.455