Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05804 ATGAATTCCCCCCCATCTGATAGAGTCATTATTCTACCCAGAGAATTGGGTAGTACGGATGACATTTTCGATGGAATTGATAGAAAAAACGGACATTTAATAAACACTCATGGTGAGGTGGATGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACAGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACTTTGGATGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTCAGAGCAAAAACTTTGACAAATTCTTTAGGAGATACTGTTTCTTCAACTAATTCCAATGCATCAAGCCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCATGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCCGCAAAAATATCAGAAATGATGAAATCAAATAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGGGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCGACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTAGAAACAATAAAAAAACAATATGAAGCGCAATGCTCACAGTTGGAAGAAGAAGTTAGGGATGCTAAAGTAGATTTGAGACAGAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGGAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCCCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAATTATCAAGCCGTCCTTGCAGAAAATAAAAAATTGTTCAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATTGGTGAAAATGATTTGGTTGTGGCGAATCCCTCCAAAGAAGGGAAAGATGCACATCGATCATTTAAGTTCAACAAGATTTTCGGTCCTACCGCAACTCAAGGAGACGTATACGCTGATATTTATCCTTTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCAAACTTCACGGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTTTTTTGCTTCTCTTGTTTCCTTGATTTGCACACACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCAGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCAAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTGAGCATGTCAGTCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTCGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGGAGCTATAAGCACCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCATATACAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATTACGAGTGAAGCTAAAAAATCTTCAAAAACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCAGTAAGGAAATTAGGCCGAATCTCATCTACCACGGCTATATCAAAAACAAAGGAATCTTCGAAGGAATCCTCGAAGAAACCATCAGGTATTGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAAAGATGGCTTTAG 3174 0.3894 MNSPPSDRVIILPRELGSTDDIFDGIDRKNGHLINTHGEVDAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLDALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENEMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLETIKKQYEAQCSQLEEEVRDAKVDLRQKSHEYEHRLEELKNEAKELEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDFFCFSCFLDLHTLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSMSVGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDHIQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSKTTKSNALSKTYQAVRKLGRISSTTAISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05804 1057 ProSiteProfiles Kinesin motor domain profile. 514 843 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05804 1057 MobiDBLite consensus disorder prediction 1020 1057 - -
Trre7g05804 1057 Pfam Calponin homology (CH) domain 44 144 IPR001715 GO:0005515
Trre7g05804 1057 Gene3D Kinesin motor domain 455 845 IPR036961 -
Trre7g05804 1057 SMART kinesin_4 512 851 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05804 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 876 IPR027417 -
Trre7g05804 1057 SUPERFAMILY Calponin-homology domain, CH-domain 37 157 IPR036872 -
Trre7g05804 1057 Gene3D - 34 150 IPR036872 -
Trre7g05804 1057 MobiDBLite consensus disorder prediction 951 1005 - -
Trre7g05804 1057 Coils Coil 356 433 - -
Trre7g05804 1057 PANTHER KINESIN-LIKE PROTEIN KLP-3 366 1029 IPR027640 GO:0003777|GO:0007018
Trre7g05804 1057 MobiDBLite consensus disorder prediction 945 1005 - -
Trre7g05804 1057 Coils Coil 311 331 - -
Trre7g05804 1057 Coils Coil 494 514 - -
Trre7g05804 1057 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 456 845 - -
Trre7g05804 1057 MobiDBLite consensus disorder prediction 154 188 - -
Trre7g05804 1057 Pfam Kinesin motor domain 520 843 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05804 1057 MobiDBLite consensus disorder prediction 1037 1051 - -
Trre7g05804 1057 Coils Coil 847 867 - -
Trre7g05804 1057 SMART ch_5 44 147 IPR001715 GO:0005515
Trre7g05804 1057 ProSiteProfiles Calponin homology (CH) domain profile. 42 149 IPR001715 GO:0005515
Trre7g05804 1057 Gene3D - 351 392 - -
Trre7g05804 1057 PRINTS Kinesin heavy chain signature 744 762 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05804 1057 PRINTS Kinesin heavy chain signature 713 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05804 1057 PRINTS Kinesin heavy chain signature 793 814 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05804 1057 PRINTS Kinesin heavy chain signature 588 609 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05804 Trre-Chr7 62918171 62923603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05804 348 874 Calmodulin-binding Proteins AT5G65930 33.396 7.09e-67 244