Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05803 ATGAATTCCCCCCCATCTGATAGAGTCATTATTCTACCCAGAGAATTGGGTAGTACGGATGACATTTTCGATGGAATTGATAGAAAAAACGGACATTTAATAAACACTCATGGTGAGGTGGATGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACAGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACTTTGGATGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTCAGAGCAAAAACTTTGACAAATTCTTTAGGAGATACTGTTTCTTCAACTAATTCCAATGCATCAAGCCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCATGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCCGCAAAAATATCAGAAATGATGAAATCAAATAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGGGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCGACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGAGCGAAGTTTGGCAACAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTAGAAACAATAAAAAAACAATATGAAGCGCAATGCTCACAGTTGGAAGAAGAAGTTAGGGATGCTAAAGTAGATTTGAGACAGAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGGAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCCCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAATTATCAAGCCGTCCTTGCAGAAAATAAAAAATTGTTCAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATTGGTGAAAATGATTTGGTTGTGGCGAATCCCTCCAAAGAAGGGAAAGATGCACATCGATCATTTAAGTTCAACAAGATTTTCGGTCCTACCGCAACTCAAGGAGACGTATACGCTGATATTTATCCTTTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCAAACTTCACGGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTTTTTTGCTTCTCTTGTTTCCTTGATTTGCACACACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCAGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCAAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTGAGCATGTCAGTCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTCGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGGAGCTATAAGCACCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCATATACAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATTACGAGTGAAGCTAAAAAATCTTCAAAAACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCAGTAAGGAAATTAGGCCGAATCTCATCTACCACGGCTATATCAAAAACAAAGGAATCTTCGAAGGAATCCTCGAAGAAACCATCAGGTATTGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAAAGATGGCTTTAG 3192 0.39 MNSPPSDRVIILPRELGSTDDIFDGIDRKNGHLINTHGEVDAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLDALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENESEVWQQMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLETIKKQYEAQCSQLEEEVRDAKVDLRQKSHEYEHRLEELKNEAKELEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDFFCFSCFLDLHTLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSMSVGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDHIQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSKTTKSNALSKTYQAVRKLGRISSTTAISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05803 1063 Pfam Calponin homology (CH) domain 44 144 IPR001715 GO:0005515
Trre7g05803 1063 MobiDBLite consensus disorder prediction 1043 1057 - -
Trre7g05803 1063 Coils Coil 853 873 - -
Trre7g05803 1063 ProSiteProfiles Kinesin motor domain profile. 520 849 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05803 1063 PANTHER KINESIN-LIKE PROTEIN KLP-3 372 1035 IPR027640 GO:0003777|GO:0007018
Trre7g05803 1063 SUPERFAMILY Calponin-homology domain, CH-domain 37 157 IPR036872 -
Trre7g05803 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 882 IPR027417 -
Trre7g05803 1063 Coils Coil 311 331 - -
Trre7g05803 1063 Gene3D - 34 150 IPR036872 -
Trre7g05803 1063 MobiDBLite consensus disorder prediction 154 188 - -
Trre7g05803 1063 Gene3D Kinesin motor domain 463 851 IPR036961 -
Trre7g05803 1063 PRINTS Kinesin heavy chain signature 750 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05803 1063 PRINTS Kinesin heavy chain signature 719 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05803 1063 PRINTS Kinesin heavy chain signature 594 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05803 1063 PRINTS Kinesin heavy chain signature 799 820 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05803 1063 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 462 851 - -
Trre7g05803 1063 MobiDBLite consensus disorder prediction 1026 1063 - -
Trre7g05803 1063 SMART ch_5 44 147 IPR001715 GO:0005515
Trre7g05803 1063 SMART kinesin_4 518 857 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05803 1063 Pfam Kinesin motor domain 526 849 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05803 1063 Gene3D - 357 398 - -
Trre7g05803 1063 MobiDBLite consensus disorder prediction 957 1011 - -
Trre7g05803 1063 Coils Coil 362 439 - -
Trre7g05803 1063 ProSiteProfiles Calponin homology (CH) domain profile. 42 149 IPR001715 GO:0005515
Trre7g05803 1063 MobiDBLite consensus disorder prediction 951 1011 - -
Trre7g05803 1063 Coils Coil 500 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05803 Trre-Chr7 62918171 62923603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05803 354 880 Calmodulin-binding Proteins AT5G65930 33.396 8.18e-67 244