Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05802 ATGAATTCCCCCCCATCTGATAGAGTCATTATTCTACCCAGAGAATTGGGTAGTACGGATGACATTTTCGATGGAATTGATAGAAAAAACGGACATTTAATAAACACTCATGGTGAGGTGGATGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACAGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACTTTGGATGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTCAGAGCAAAAACTTTGACAAATTCTTTAGGAGATACTGTTTCTTCAACTAATTCCAATGCATCAAGCCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCATGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCCGCAAAAATATCAGAAATGATGAAATCAAATAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGGGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCGACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGAGCGAAGTTTGGCAACAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTAGAAACAATAAAAAAACAATATGAAGCGCAATGCTCACAGTTGGAAGAAGAAGTTAGGGATGCTAAAGTAGATTTGAGACAGAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGGAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCCCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAATTATCAAGCCGTCCTTGCAGAAAATAAAAAATTGTTCAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATTGGTGAAAATGATTTGGTTGTGGCGAATCCCTCCAAAGAAGGGAAAGATGCACATCGATCATTTAAGTTCAACAAGATTTTCGGTCCTACCGCAACTCAAGGAGACGTATACGCTGATATTTATCCTTTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCAAACTTCACGGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTGTTGTCAACCGAGGGTTCTCCAAAAAGACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCAGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCAAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTGAGCATGTCAGTCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTCGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGGAGCTATAAGCACCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCATATACAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATTACGAGTGAAGCTAAAAAATCTTCAAAAACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCAGTAAGGAAATTAGGCCGAATCTCATCTACCACGGCTATATCAAAAACAAAGGAATCTTCGAAGGAATCCTCGAAGAAACCATCAGGTATTGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAAAGATGGCTTTAG 3186 0.3911 MNSPPSDRVIILPRELGSTDDIFDGIDRKNGHLINTHGEVDAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLDALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENESEVWQQMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLETIKKQYEAQCSQLEEEVRDAKVDLRQKSHEYEHRLEELKNEAKELEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDLLSTEGSPKRLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSMSVGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDHIQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSKTTKSNALSKTYQAVRKLGRISSTTAISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05802 1061 SMART kinesin_4 518 855 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05802 1061 Pfam Calponin homology (CH) domain 44 144 IPR001715 GO:0005515
Trre7g05802 1061 MobiDBLite consensus disorder prediction 1024 1061 - -
Trre7g05802 1061 SUPERFAMILY Calponin-homology domain, CH-domain 37 157 IPR036872 -
Trre7g05802 1061 MobiDBLite consensus disorder prediction 955 1009 - -
Trre7g05802 1061 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 462 849 - -
Trre7g05802 1061 Gene3D Kinesin motor domain 464 849 IPR036961 -
Trre7g05802 1061 MobiDBLite consensus disorder prediction 949 1009 - -
Trre7g05802 1061 Coils Coil 311 331 - -
Trre7g05802 1061 Gene3D - 34 150 IPR036872 -
Trre7g05802 1061 MobiDBLite consensus disorder prediction 154 188 - -
Trre7g05802 1061 PANTHER KINESIN-LIKE PROTEIN KLP-3 370 1033 IPR027640 GO:0003777|GO:0007018
Trre7g05802 1061 MobiDBLite consensus disorder prediction 1041 1055 - -
Trre7g05802 1061 Coils Coil 851 871 - -
Trre7g05802 1061 ProSiteProfiles Kinesin motor domain profile. 520 847 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05802 1061 SMART ch_5 44 147 IPR001715 GO:0005515
Trre7g05802 1061 Pfam Kinesin motor domain 526 847 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05802 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 880 IPR027417 -
Trre7g05802 1061 Gene3D - 357 398 - -
Trre7g05802 1061 Coils Coil 362 439 - -
Trre7g05802 1061 ProSiteProfiles Calponin homology (CH) domain profile. 42 149 IPR001715 GO:0005515
Trre7g05802 1061 Coils Coil 500 520 - -
Trre7g05802 1061 PRINTS Kinesin heavy chain signature 717 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05802 1061 PRINTS Kinesin heavy chain signature 797 818 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05802 1061 PRINTS Kinesin heavy chain signature 748 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05802 1061 PRINTS Kinesin heavy chain signature 594 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05802 Trre-Chr7 62918171 62923603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05802 354 878 Calmodulin-binding Proteins AT5G65930 34.275 4.06e-70 254