Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05801 ATGAATTCCCCCCCATCTGATAGAGTCATTATTCTACCCAGAGAATTGGGTAGTACGGATGACATTTTCGATGGAATTGATAGAAAAAACGGACATTTAATAAACACTCATGGTGAGGTGGATGCTAAACATCGATCGGTTTTGGTTCAATGGTTAAATAATCTTCTCCCTTCGTTGGACTTCTCGACAAATGTCACAGATGGTGAATTAAGAGCAAGCTTGAGCAATGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCCGGTTCCGTGACTATGGTCAGTGAATCTGATCATTCACTTCCATCACAATCAGAAAACGTTAAAACGTTTCTCAGAACTTTGGATGCATTAGGGTTGCCCCGGTTCGAAATATCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTCAGAGCAAAAACTTTGACAAATTCTTTAGGAGATACTGTTTCTTCAACTAATTCCAATGCATCAAGCCCTCGTGGGTTTGCAGCTTCGAGTTTTCATTATTCGCCACCATCTAGTGTGACAGATCAGAGGAAGGTTTCAACTGAGTCAAGGTTTCAAGGTGTTATGAGTAGCCCTCTTATGGCGGAATCATCAGCTTCATTAATATACCAAGTTGGTCATAAATTCCATGAGGTTTTTCAAATTAAACCCGGTAGCTATGCAGATCTTCCTGCCGCAAAAATATCAGAAATGATGAAATCAAATAGTTTAGATAACGCTCCCACGCAGTCACTACTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAAAGAAGAAATGGAGAAATACCTCATCGGGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATTGAACGGCGCATATCGACTCAAGCAGAACATATACGAACTCAAAGTAATCTTTTTAAAGCTCGGGAAGAAAAATATCAATCGAGAATACGAGTACTCGAGGCACTTGTATCTGAAACTAGAGAAGAGAATGAGTTTTTTGTTTATCAGAGCGAAGTTTGGCAACAGATGTTTACTACACAGCTTCAACAGTTGAAGGTCACAGACGTAGAAAAGAAGGAAAATGAAAAAGAAGTTATTAGGTTGACGAAACTGCTAGAGGACAAAAACGTAGAAATTTCAGAATTGACGCAAAAACTAGAAACAATAAAAAAACAATATGAAGCGCAATGCTCACAGTTGGAAGAAGAAGTTAGGGATGCTAAAGTAGATTTGAGACAGAAGTCTCATGAATATGAGCATCGATTAGAAGAATTGAAGAACGAGGCTAAGGAACTCGAGGCTTCTTCGGATTCAAAATATCAGGAGTGGAGCATGAAAAAGAACCAATTGCAGACTGTTCTAAATTTTCAATCTAGTTCCCTACAGAAATTTAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATTAAAGGGAGAGCGGTTTATGCAGAAGAGTGTAATCGATTAAGTTTAAATCTCAAACCACTCGTACATGCATCTCAGAATTATCAAGCCGTCCTTGCAGAAAATAAAAAATTGTTCAATGAAGTTCAAGAACTAAAAGGAAATATAAGAGTATTTTGTCGAATTAGACCATTCCTTTTAAGCAAAAAGGAAAAACAGTCTATTGTAGAAGACATTGGTGAAAATGATTTGGTTGTGGCGAATCCCTCCAAAGAAGGGAAAGATGCACATCGATCATTTAAGTTCAACAAGATTTTCGGTCCTACCGCAACTCAAGGAGACGTATACGCTGATATTTATCCTTTTGTAAGATCAGTACTTGATGGATACAATGTATGTATATTCGCTTATGGCCAAACTGGTTCAGGAAAAACTTACACAATGACTGGTCCAAATGGAGCAACAAGCGAGAATCTCGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAACATTTCCACAAGTAGAGCAAACTTCACGGACTATGAGATTTGGGTCCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTGTTGTCAACCGAGGGTTCTCCAAAAAGACTTGGGATATTGACTCAATTGCAATCCAACGGTATAGCAGTACCAGAAGCTAGCATGTACCCCGTAAAATCACCTTCAGATGTTATTAAGTTGATGGATATTGGCCTTAAAAATAGAGCTATCGGTGCGACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTGGTCTCAATTCATGTTCGCGGGAAGGAATTCAAGTCAGGTTCTACTCTGCACGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTAGATCGGTCTGAAGTAACCGGAGATCGGCTTAAGGAAGCACAACATATTAACAAATCTCTTTCTGCCCTCGGAGATGTCATTTTTGCGCTTTCACAAAAGAGCTCATATATACCGTATAGAAACAGCAAGCTTACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCAAAGACTCTCATGTTTGTCCAAATTAACTCGGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGAGTTTCTTCAGTTGAACTAGGAGCTGCTCGAAATAATAAGGAGGCAAGAGAATTAATGGAACAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGACGAGGAGATTGAGCGGCTTAAGTCGCTAAGTGCGTCAGCTGGTGGTATTTCTAAGTCGCTGAGCATGTCAGTCGGTGGTATTTCTAAGTCGCTAAGCATGTCAGTCGGTGGTATTTCTAAGCAAATTCAAAAACTACCAAGTGGGAGCTATAAGCACCCTGTTGAAAGTGATATCCAACAAGCAATGGATGATCATATACAGAAAAATGAACTTCTACGTTCATATGGAACTTCTAGGCGAGAAACTCGAGGATTTTCAGATACAAATTCTCAAGAAAGATCAAGTGATTTTTCGGACAATAATAGTATTGCTCTAGGCACAGAAACTGATGGTTCTTCTGATAATTCTATTACGAGTGAAGCTAAAAAATCTTCAAAAACGACAAAGTCTAATGCATTATCCAAAACATATCAAGCAGTAAGGAAATTAGGCCGAATCTCATCTACCACGGCTATATCAAAAACAAAGGAATCTTCGAAGGAATCCTCGAAGAAACCATCAGGTATTGCGAAAAGCACCAGTATTGACCAAATTAAACCTTCAAAAAGATGGCTTTAG 3201 0.3902 MNSPPSDRVIILPRELGSTDDIFDGIDRKNGHLINTHGEVDAKHRSVLVQWLNNLLPSLDFSTNVTDGELRASLSNGTVLCQILNKLRPGSVTMVSESDHSLPSQSENVKTFLRTLDALGLPRFEISDLEKGSMKPVVDCLLILRAKTLTNSLGDTVSSTNSNASSPRGFAASSFHYSPPSSVTDQRKVSTESRFQGVMSSPLMAESSASLIYQVGHKFHEVFQIKPGSYADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALVSETREENEFFVYQSEVWQQMFTTQLQQLKVTDVEKKENEKEVIRLTKLLEDKNVEISELTQKLETIKKQYEAQCSQLEEEVRDAKVDLRQKSHEYEHRLEELKNEAKELEASSDSKYQEWSMKKNQLQTVLNFQSSSLQKFKLSWESIKQDVIKGRAVYAEECNRLSLNLKPLVHASQNYQAVLAENKKLFNEVQELKGNIRVFCRIRPFLLSKKEKQSIVEDIGENDLVVANPSKEGKDAHRSFKFNKIFGPTATQGDVYADIYPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSENLGVNYRALNDLFNISTSRANFTDYEIWVQMVEIYNEQVRDLLSTEGSPKRLGILTQLQSNGIAVPEASMYPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVVSIHVRGKEFKSGSTLHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSYIPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKEARELMEQVTSMKNTILKKDEEIERLKSLSASAGGISKSLSMSVGGISKSLSMSVGGISKQIQKLPSGSYKHPVESDIQQAMDDHIQKNELLRSYGTSRRETRGFSDTNSQERSSDFSDNNSIALGTETDGSSDNSITSEAKKSSKTTKSNALSKTYQAVRKLGRISSTTAISKTKESSKESSKKPSGIAKSTSIDQIKPSKRWL 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05801 1066 ProSiteProfiles Kinesin motor domain profile. 525 852 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05801 1066 SUPERFAMILY Calponin-homology domain, CH-domain 37 157 IPR036872 -
Trre7g05801 1066 Gene3D Kinesin motor domain 470 854 IPR036961 -
Trre7g05801 1066 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 467 854 - -
Trre7g05801 1066 Coils Coil 856 876 - -
Trre7g05801 1066 Coils Coil 311 331 - -
Trre7g05801 1066 MobiDBLite consensus disorder prediction 154 188 - -
Trre7g05801 1066 Gene3D - 362 403 - -
Trre7g05801 1066 Coils Coil 367 444 - -
Trre7g05801 1066 Pfam Kinesin motor domain 531 852 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05801 1066 Gene3D - 34 150 IPR036872 -
Trre7g05801 1066 SMART ch_5 44 147 IPR001715 GO:0005515
Trre7g05801 1066 Coils Coil 505 525 - -
Trre7g05801 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 525 885 IPR027417 -
Trre7g05801 1066 PANTHER KINESIN-LIKE PROTEIN KLP-3 375 1038 IPR027640 GO:0003777|GO:0007018
Trre7g05801 1066 ProSiteProfiles Calponin homology (CH) domain profile. 42 149 IPR001715 GO:0005515
Trre7g05801 1066 MobiDBLite consensus disorder prediction 1029 1066 - -
Trre7g05801 1066 MobiDBLite consensus disorder prediction 1046 1060 - -
Trre7g05801 1066 Pfam Calponin homology (CH) domain 44 144 IPR001715 GO:0005515
Trre7g05801 1066 MobiDBLite consensus disorder prediction 960 1014 - -
Trre7g05801 1066 PRINTS Kinesin heavy chain signature 753 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05801 1066 PRINTS Kinesin heavy chain signature 802 823 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05801 1066 PRINTS Kinesin heavy chain signature 722 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05801 1066 PRINTS Kinesin heavy chain signature 599 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05801 1066 SMART kinesin_4 523 860 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre7g05801 1066 MobiDBLite consensus disorder prediction 954 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05801 Trre-Chr7 62918171 62923603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05801 362 883 Calmodulin-binding Proteins AT5G65930 34.470 3.96e-70 254