Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05795 ATGGAAGTTCCTGATGGAAATGGAGAGCATATTGTTGATGAGAATGAAGAGGATACTCTCAATGAGATTGCCGGAAATGATTCATGTCCGGTTGATTTAGAGGCCATTAATGTTATTCAAGAACCATACATTGGAATGGAATTTGATTCCCAAGAAAATGCTTATTCATTCTACACACAGTATGCTAAGTGTACCGGGTTTGGGATATCAATTAAAAACAGTCGCCGTTCAAAGGTTTCTAGAGAGTTTATTGACGCGAATTATGCTTGCACAAGATACGGGGAGAAACGAGAATCCACGGCACAAAATCCGCGTCCATGTTTGAAGGTGGGATGTGAGGCCAGCTTACGAATTAAAAGAAATTGTGAAGGAAAATGGATTGTTCATAACTTCATCAAAGACCACAATCATGAGCTTTTTCCGGCATATGCACATTATTTTCCTTGCCATAGAGGAATCAATAAAGCTCAAAAGCATGCTATTGAAACTTTGCAGCATGTTGGAGTGAGAACAACCAAAATTTATGCCTCAATGGCCAAACAATATGGAGGATACGAAAATATTGGTTGCTTGGAGAAAGATATTAGAAATCATTTAAATAAAGGTCGGCGTTTGGATTTAGAATCAGGAGATGCAAATTCAATGTTGGAGTGTTTTATGCTCATGCAAGAAGAAAATCCAAGATTCTTTTATGCAATTGATTTGGATGATGAAGACCGGATAAAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGAAGACTATCAAGAGTTTGGAGATGTGATTTCATTTGATACCACTTATATCACAAATAAATACAAAATGCCATTTGCTCCTTTTATTGGTGTAAACAATCACTTTCAATCAAGGTTACTTGGTTGTGCATTACTCTCAGACGAGTCCATGCATACTTTCATATGGTTGATGAAAACATGGCTTAGAGCAATGGGTGGAAAACCTCCAAATGCAATTATAACAGATCAAGATAGGGCAATGAAAGCGGCTATTAAAGAGGTATTTCCAAATACTCGACATAGATTTTGTCTTTGGCATATACTTAAAAAGGTGCCTGAGAAGCTTAGTCATGTATTAACAAAAGATGAAGAGTTCAAGAGACATCTCAACATATGCATTTATAAGTCTTGGTCAAAACAACAATTTGAAGATAAATGGCATGAAATGGTGGAAAAATTTCAACTAATGGAAGATGGGTGGATTAGTTCATTATACGAAGAACGTGAACATTGGGTCCCTGTTTACATGAAGGATACATTTTTTGGTGGCTTGTCAACTACTCAAAGATCAGAGAGCATTAATGCTTTTTTTGACAAATATGTATGTAAGAAAACTACATTAAAAGAGTTTGTTGAAAAATATAAAGTTGCTTTACAGGATAGAGAAGAGGCAGAAAAGCAAGCAGATTTTAATACATGGCACAAGCAACCTGTTCTTAGGACTCCATCACCTTTTGAGAAGCAAATGTCGACTATTTATACGCATGAAATTTTCAAGAAATTTCAAGCTGAAGTTTTGGGATTATCTGGATGTCATATTGTGGAAGAGCATAAAGACAATCTAGTTACCACTTTTAAAATTTTCGACTTTGAGAAAAATGAAGAGTTTATTGTAGAATGTGATGTATCGAAAGAGGAAACATCTTGCCTATGTCACTTGTTTGAGTATAATGGGTATCTTTGTAGACATTCGTTAATGGCCCTCCAAGCTGCTGGTGTCTTTGTTGTCCCATCACACTATATATTGAGAAGATGGACCAAGAATGTTAGAAGCAAACAAAACCAGAGGAAAATGAAAGATGTTTGTTCTAGTAAGGAAAGATATGATTGTTTATATCAGAAAGCTATTGAGTTGATCCACGAAGGATCACTAAGCTTTGAGAGTTCCAATGTTGCATTTCATGCACTTGAAGAGACCTTGAAACAATGTGTAACTATTAATAAATCTTTGAAAATCGGCAAGGAAAAAGTTGGTCAAAATAGTTCACATGAGAAACCACTGCGTGATCCTCGACCATCAAAAACAAAAGGGGCTCCTACAAAAAGAATGAAGAGTGGGATAGAAAAAGGTCATAAGAGAACATCTAGTGCTAAAGTAAAAAAGTCTGATATTGTTCAAAGAGAAGCAATAAACAACTCAAATGTCCTCAATGATGAAGTGCCTTTTCCATCAACAAGAATGGAAAATCAACAGGGTTCAAGGAATTAA 2223 0.3585 MEVPDGNGEHIVDENEEDTLNEIAGNDSCPVDLEAINVIQEPYIGMEFDSQENAYSFYTQYAKCTGFGISIKNSRRSKVSREFIDANYACTRYGEKRESTAQNPRPCLKVGCEASLRIKRNCEGKWIVHNFIKDHNHELFPAYAHYFPCHRGINKAQKHAIETLQHVGVRTTKIYASMAKQYGGYENIGCLEKDIRNHLNKGRRLDLESGDANSMLECFMLMQEENPRFFYAIDLDDEDRIKNVFWVDAKGREDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLSDESMHTFIWLMKTWLRAMGGKPPNAIITDQDRAMKAAIKEVFPNTRHRFCLWHILKKVPEKLSHVLTKDEEFKRHLNICIYKSWSKQQFEDKWHEMVEKFQLMEDGWISSLYEEREHWVPVYMKDTFFGGLSTTQRSESINAFFDKYVCKKTTLKEFVEKYKVALQDREEAEKQADFNTWHKQPVLRTPSPFEKQMSTIYTHEIFKKFQAEVLGLSGCHIVEEHKDNLVTTFKIFDFEKNEEFIVECDVSKEETSCLCHLFEYNGYLCRHSLMALQAAGVFVVPSHYILRRWTKNVRSKQNQRKMKDVCSSKERYDCLYQKAIELIHEGSLSFESSNVAFHALEETLKQCVTINKSLKIGKEKVGQNSSHEKPLRDPRPSKTKGAPTKRMKSGIEKGHKRTSSAKVKKSDIVQREAINNSNVLNDEVPFPSTRMENQQGSRN 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05795 740 MobiDBLite consensus disorder prediction 662 710 - -
Trre7g05795 740 MobiDBLite consensus disorder prediction 660 740 - -
Trre7g05795 740 ProSiteProfiles Zinc finger SWIM-type profile. 541 577 IPR007527 GO:0008270
Trre7g05795 740 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 649 IPR031052 GO:0006355
Trre7g05795 740 Pfam MULE transposase domain 261 355 IPR018289 -
Trre7g05795 740 Coils Coil 452 472 - -
Trre7g05795 740 SMART 26again6 552 579 IPR006564 GO:0008270
Trre7g05795 740 MobiDBLite consensus disorder prediction 711 740 - -
Trre7g05795 740 Pfam SWIM zinc finger 545 576 IPR007527 GO:0008270
Trre7g05795 740 Pfam FAR1 DNA-binding domain 56 141 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05795 Trre-Chr7 62874433 62876841 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre7g05795 MULE 3.5e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05795 - - mtr:112418473 1076.23