Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05793 ATGTTGATAACAACCTCGTTTTTTCTTTCATCACTCACCTTCTTCCTCCTCTTCATTCTCTCCGCCACCACCTTCTTCCTCCGTCGCAAAAATGACCGGAAAACTCCACCAGGTCCACCGGGATTCCCAATCATCGGTAGTCTCCACATGTTAGGTACCCTCCCACACCGAACCCTCCAAGCCTTATCCAAAAAATACGGTCCAATCATGTCAATACGATTAGGACAAGTTCCAACAATCATTGTCTCTTCATCTTCAGCTGCAGAACAATTTCTCAAAACAAACGACGTCGTTTTCTCAAGCCGTCCAAAACTTGAAGCTACTCATTATCTCTCTTATGGTTCTAAAGGTTTGGTTTTCTCTGAATACGGTCCTTATTGGCGTAATGTCAGAAAAATTTGTACTCTGCAGCTTTTAAGTGCTTCTAAAGTTGAGTCGTTTTGGCCTTTGAGGAAAAGGGAAATGGAATTGGCTATGAAGTTGGTAAAGAAATCTTCTAGTTTAGGTGAGGTTGTTGATTTGAGTGAGTTTGTTCATAATGTTATTATGGATATTGTTTATAAAATGGTGTTGGGGTGTAGTGTTGATGAGGAGTTTGATTTAAAGGGACAAATTCAACAGGGGATGGAACTTTCTGGTGCTTTTAATCTTTCTGATTATGTTCCTTTTCTTGGAGTTTTTGATCTTCAGGGATTAAAAAGAAAGTACAAGAGAACTAGTAAAGCAATGGACCAAGTGTTGGAGAAGATAATTAAGGAACATGAACAAAGTTCACATGTACAAAATGAAGAGAAGAAACATAAGGACTTCGTAGACATTCTACTATCACTGATGCACCAACCGATCAACCCTTCTGATGAACAAAACCATGTCATTGATCGAACAAACATAAAGGCTATACTCTTAGACATGATTGCCGGTGCATTTGAAACTTCCGCAGCCATTGTGGAGTGGGCTTTATCCGAGCTCATGAGACATCCAAGAGTGATGAAAAATCTCCAACAAGAGCTAGATAACGTGGTTGGGGTGAATAAATTAGTGGAGGAGAATGATTTGCCAAAATTAAGTTACTTAGATATTGTGATCATGGAGACCATAAGATTATATCCTGCTGGACCACTTGTGCCACGCGAGTCAACAGAGGACGCTACGGTTCATGGTTATTTTGTACCAAAAAAATCAAGAGTAATTGTAAATTTATGGGCAATAGGAAGAGATTCTGAGGTATGGCCTAATAACACTGAAGAATTTTATCCAGAGAGATTCGTAGATAAAAATTTAGACTACCGTGGACATGATTTTCAATTTATACCATTTGGTTATGGTCGAAGAGGATGTCCTGGAATACACCTGGGACTAATTACAGTTAAACTTATTGTCGCTCAATTGGTACATTGCTTTTCTTGGGAACTTCCGTCGAATATGGCTCCAAGTGATTTGGACATGGCCGAAAAATTTGGTCTCTCGATCCCAAGAGCCGAACACTTGCTTGCTGTGCCAACTTACCGTCTTTCTGAGGAAGCAACATGA 1530 0.3987 MLITTSFFLSSLTFFLLFILSATTFFLRRKNDRKTPPGPPGFPIIGSLHMLGTLPHRTLQALSKKYGPIMSIRLGQVPTIIVSSSSAAEQFLKTNDVVFSSRPKLEATHYLSYGSKGLVFSEYGPYWRNVRKICTLQLLSASKVESFWPLRKREMELAMKLVKKSSSLGEVVDLSEFVHNVIMDIVYKMVLGCSVDEEFDLKGQIQQGMELSGAFNLSDYVPFLGVFDLQGLKRKYKRTSKAMDQVLEKIIKEHEQSSHVQNEEKKHKDFVDILLSLMHQPINPSDEQNHVIDRTNIKAILLDMIAGAFETSAAIVEWALSELMRHPRVMKNLQQELDNVVGVNKLVEENDLPKLSYLDIVIMETIRLYPAGPLVPRESTEDATVHGYFVPKKSRVIVNLWAIGRDSEVWPNNTEEFYPERFVDKNLDYRGHDFQFIPFGYGRRGCPGIHLGLITVKLIVAQLVHCFSWELPSNMAPSDLDMAEKFGLSIPRAEHLLAVPTYRLSEEAT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05793 509 Pfam Cytochrome P450 36 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 FunFam Cytochrome P450 83B1 23 499 - -
Trre7g05793 509 Coils Coil 330 350 - -
Trre7g05793 509 PANTHER CYTOCHROME P450 93A3-LIKE 14 505 - -
Trre7g05793 509 SUPERFAMILY Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Trre7g05793 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 CDD CYP71-like 65 496 - -
Trre7g05793 509 Gene3D Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g05793 509 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05793 Trre-Chr7 62863103 62865552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05793 42 504 Monolignol Biosynthesis Gene Families AT4G36220 39.040 2.07e-123 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05793 - - gmx:100814172 700.664