Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05789 ATGGAGGTTCTCAAAGATAGGTGCCTTATATCTATTTCCGAAGGTAGAATTGTTATGCATGATCTAGTACAGGAAATGGGACATGAAATTGTTCGTCAACAATGTGTTAATGATACTGGAAAGCGCAGTCGATTATGGAAGCCTGAGGATATTTATGATGTTTTGGGAAAGAACAAGGGGACAGATGCAATCCAATGTATATTCCTGGACATATCCAAAATAAGAAAGGTTCAACTACATCCTGAAACTTTTGAAAAGATGCATAATCTTAGAATGATCCAGTTCTATAGTCCTTCTAGCTCTTCTTGCCACTCAAACGTGACTCTTCCTGCATTTCTTAAGAGTCTTCCAGATGATTTAATATTTCTTCGTTGGGATGGCTTTCCTCAAAGATCTTTTCCGTTGAACTTTTGTCCCGAATATCTTGTTAAACTTGATATGCCTCATAGCCATCTTGAACAACTCTGGGAGGGAAATCAGGTTTTACCGAATTTGAAAAGGATCAACCTTAGTAATTCTCGTAAGCTGAGACAACTACCAGACCTCTGTCTATCCCCAAATATTGAAGAAATAATTCTTACTTATTGTTCAAACTTGGTTAAAGTATACTCCTCAAGGTTCATCAACAACCTCAATTATTTATGTTTACATGGCTGTGTTAAGCTTAGGAGTTTAAATCTCCCTAGCAATATTCTATCAGGATCTCCTGGATTAGTTCTTCTTTATGGTTGTTACAAGCTTGAAACATTTTTAATCAGCAATAGAACCAAGGTAGTTCAACCATCCGGTTCATCACATTGTCATGGATTCAAGGAAGTGAGCGAAATTTCCTGGGCTAAGATTAGGGGAGATGTACCCACGAAAGTACTGTCGGGCGACTGCAACAGCAGAGAATACTCTTCAGCTACTTTTGATCCCATCTTTAGCACAGCTGACAAATATGAAGAAAACCATGTGGATAATAGATACTTAAGAGAAATTAAAATGGAGATACAAACTATGCCCTCATTGTTCACAAGTATCAATGAACTTTGTTGGTTAGATATGACTGACTGTGAATCCCTAACTAGCATACCAGGTGAAATTTTCAAGTTGAAATTCCTAACAAGATTTTATCTCGGTGGTTGTTTCAATTTGAAAAAATTACCTGAAATTGAGGAGACTATGGAAAATCTATTACTGCTTGTCTTAGATAAAACAGCAATAAGGGAACTACCTTCATCTTTGGACCATTTGGTCGGCCTTGAAAACTTGAGCTTGCAAATGTGTGTCAAACTTGTGATTATTCCACCTTCTATTGGAAATCTCAGCAAACTAAGCAAGTTAAACCTTACTTACTGTGAATCACTTGAAACTTTTCCAAGCAGCATTTTCAAACTGAAGTTGACAAAACTTGATTTGCATGGTTGTTCTATGCTGAAGACCTTCCCAGAGATCTTGGAGCCTTCAGAAACATTTTCTCACATTAACTTGACAAAAACAGCAATTAAGGAACTACCTTCATCCTTGAAGTATTTGGTTGGTCTTCGAAACTTGTGTCTTAACTTGTGCTGTGATCTTATGTCACTTCCAAATAGCATTGTTAATCTAAAGCAGTTATCTCATCTTGATTGTTCTGGCTGCAAAAGTTTAACCGAAATCCCAAAAAACATTGGTTTCATGCCATCATTGAAGGAACTTTCACTGCAAAAAAGCAGTATTGTGAACCTTCCTGAGAGTATAGTTCATCTCTCAAGCTTGAAATCACTTGATTTAAGTGATTGCAAAAGACTTGAATGTATCCCACAGCTTCCACCATATATAAACCAATTGTTGACCTTTGATTGTCCATCCATTAAGAGAATGATGTCAAATTCAATTTCAACAGGGTTAAACTTAAACCTCCCATCAGATTCCAATGAGACCAGTAGTACCTTCAAATTTCATTTCACAAATAGTGAACAACTGGATGCAAGTGCTCGTAGAAATATTGCGGCTGAAGCATTGCTTAGGATCACTAAGGTTGAATATAGGTCTGTGTTCTTCTGTTTTCCTGGAAATGCAATTCCTCGTTGGTTCCCTTATCGTCGTCAGGGACACTCAGTGACAGCAAAAAAAACCTCGCTAGATTGGTGCAGTAGTAATAATAGGCTTGTTGGTTTCGCTCTGTGTGTCGTTTTAGGACATGTTGATGATTATGCAAGACCTACGGGGTGTAGCATTACATATACATTAACATTTGAATTTGATGGCCGCACACACACTCTTCCCATTCCCAATGATGACATGATAAAAAACTATTTCCATTGGAAGGGAGCAAGGCATGCCGTCCAAAACCACACATTCATATGGAAATATCAATTGGACTTTCAAAGTATTAGTGACAACAACATGCTCTTTCATGCAGACAACTTTACTTTGAAGTTGAGCAAATACAATCATCGCTCTGATGTGGTGAAAGGGTGCGGGTTATGCCCTCTTTATATCAATGAAAAGGATCATAATGGTGTGCAATTTTTAAATAATGACATTGAAGAACCCAGTGGGAGCAATGCTTCATAG 2541 0.3762 MEVLKDRCLISISEGRIVMHDLVQEMGHEIVRQQCVNDTGKRSRLWKPEDIYDVLGKNKGTDAIQCIFLDISKIRKVQLHPETFEKMHNLRMIQFYSPSSSSCHSNVTLPAFLKSLPDDLIFLRWDGFPQRSFPLNFCPEYLVKLDMPHSHLEQLWEGNQVLPNLKRINLSNSRKLRQLPDLCLSPNIEEIILTYCSNLVKVYSSRFINNLNYLCLHGCVKLRSLNLPSNILSGSPGLVLLYGCYKLETFLISNRTKVVQPSGSSHCHGFKEVSEISWAKIRGDVPTKVLSGDCNSREYSSATFDPIFSTADKYEENHVDNRYLREIKMEIQTMPSLFTSINELCWLDMTDCESLTSIPGEIFKLKFLTRFYLGGCFNLKKLPEIEETMENLLLLVLDKTAIRELPSSLDHLVGLENLSLQMCVKLVIIPPSIGNLSKLSKLNLTYCESLETFPSSIFKLKLTKLDLHGCSMLKTFPEILEPSETFSHINLTKTAIKELPSSLKYLVGLRNLCLNLCCDLMSLPNSIVNLKQLSHLDCSGCKSLTEIPKNIGFMPSLKELSLQKSSIVNLPESIVHLSSLKSLDLSDCKRLECIPQLPPYINQLLTFDCPSIKRMMSNSISTGLNLNLPSDSNETSSTFKFHFTNSEQLDASARRNIAAEALLRITKVEYRSVFFCFPGNAIPRWFPYRRQGHSVTAKKTSLDWCSSNNRLVGFALCVVLGHVDDYARPTGCSITYTLTFEFDGRTHTLPIPNDDMIKNYFHWKGARHAVQNHTFIWKYQLDFQSISDNNMLFHADNFTLKLSKYNHRSDVVKGCGLCPLYINEKDHNGVQFLNNDIEEPSGSNAS 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05789 846 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 489 613 IPR044974 GO:0006952
Trre7g05789 846 Gene3D Ribonuclease Inhibitor 317 464 IPR032675 -
Trre7g05789 846 SUPERFAMILY L domain-like 19 254 - -
Trre7g05789 846 Gene3D Ribonuclease Inhibitor 62 258 IPR032675 -
Trre7g05789 846 Gene3D Ribonuclease Inhibitor 465 620 IPR032675 -
Trre7g05789 846 Pfam Leucine Rich Repeat 141 160 IPR011713 -
Trre7g05789 846 SUPERFAMILY L domain-like 322 609 - -
Trre7g05789 846 Pfam C-JID domain 677 824 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05789 Trre-Chr7 62811672 62814471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05789 409 590 WRKY Transcription Factor Family AT4G12020 39.560 1.09e-19 93.2