Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05773 ATGATGATGAAGAAAACACAAACATTCTTCTTCGTTACACTTTTTCTAACCATCATCATAAACACACTCTCCCTTTCAGCTCTCACAATCGATGACCCATCTCTTGTCTTCGAAAACAACCGTATCAGAGACGCTTACACAGCATTACAATCTTGGAAACAATCTATTCTCTCTGATCCATTAAATTTCACAACAAACTGGGTTGGATCCAATGTATGCAGCTACACTGGCATTTACTGTGCTCAAGCATTAGACAACCCTAATATACGCACAGTCGCCGGTATCGATCTCAATCACGCCGACATTGCCGGTTATTTACCTGATGAGCTTGGTCTTTTGGTAGATCTCGCACTTTTCCACATAAACTCTAACAGATTCTGTGGTACTGTACCACACACTTTCAACAAATTGAAACTTCTCTTCGAATTGGATCTCAGTAATAACAGATTCGCGGGGAAGTTTCCAGAAGTTGTATTAAACCTTCCTGCTCTCAAGTTCTTGGATATAAGGTTTAATGAATTCGAAGGTACGGTTCCAAAAGCGCTTTTTGATAAAGACCTAGACGCGATTTTCATAAACGACAACCGTTTTGCGTTTGAGTTACCTGATAATTTTGGTAACTCGCCTGTTTCCGTTGTCGTTTTGGCAAACAACAAATTCCATGGCTGCATTCCTTCCAGTATAGGGAACATGTCTAACTTAAACGAAATCAATTTTTTGAATAATTTGTTTAAATCATGTTTACCTTCTGAGATTGGATTGTTGAAGAATCTCACAGTTTTCGATGTGAGTTTTAATCAGTTGGTTGGTTCGTTACCGTCAGCTATTGGCGGTGCGGTGAGTTTGGAACAGCTTAATGTGGCGCATAATGTGTTTTCTGGTAAAATTCCAGCTAGTATTTGTATGTTGCCTAATCTTAAGAACTTTACGTTTTCGGATAATTTCTTTACTGGTGAACCTGCGGCTTGTTCTGCTTTGCCGGCGGTTGATGATAAGAGAAATTGTTTGCCGGCGAGGCCGTTACAGAGGTCTCCCGGAGAATGTGCGCCGGTTTTGTCTAAACCAGTGGATTGTAAGTCGTTTAAGTGTAAACCGTTTGATCCTTCTTTGCCTTCGCCATCGCCGGTAGTGTCGCCGATCACTCCACAACCTCCGGCAGTGTCACCTATCTCTCCGTCACCACCGGGAGTGTCACCTTCTCCTCCATCACCGCCAGCTGTGTCACCTTCTTTGCCGCCACCTGTAACAGTGACACCTATCTCTCCATCACCGCCGGAAGTTGCACCTTCTTCTCCACCACCGTCAACAGGGACACCTGTCACTCCATCACCGCCGGGAGGGGAACCTTCTTCTCCACCACCGTCAACAGGGACACCTATTTCTCCAGCACCGCCCATAGTCTCACCGTCATCTCCACCAGCCCACTCTCCTCCACATGTGTATTCACCACCTCCATCTCCAACAACTCCTGTGGTGTCGCCACCGTCACATACTACTCCAGTGCCGCCATCTCCGCCACTAAATACACCACCATCTCCTGATCCTCACTATGGTTCATCCCCTCCTCCAACTCATTCACCACCATCATGGCCCCCACATTCCCCTGTTTTTTCACCACCGCCAGTAACAACACCTTCCTCTCCACCATCGCCGGTAGTGCCACCTTTCTTTCCACCACCAACGCACTCTTCTCCGCCAGTATTTTTACCACCACCACCAGCAGATCCTCATTATGGCCAATCACCGCCTCCATCTCATCCACCTCATTCCCCTGGACCTCATCCGTCACCATCACCACCTTGTAAAGAGCATCCAGCCCCACCACCACCACCATCCTCTTCTTCCACACCACCACCGCCAGTATATGTTTCTCCACATCCACCGTTTCAATATAGTCCTCCATCACCACCACATCCTTCCCCTGTGCATTACAGTTCGCCACCACCACCACCACCCCATGTTCATTACAGCTCACCTCCGCCACCCGCATTATGGTCTCCTCCACCACCCACCCCTGCATATGGAGGCCCATTGCCACCAATCGTTGGGCTCCCCTACGCATCGCCTCCACCACCACCTTACTATTGA 2088 0.4775 MMMKKTQTFFFVTLFLTIIINTLSLSALTIDDPSLVFENNRIRDAYTALQSWKQSILSDPLNFTTNWVGSNVCSYTGIYCAQALDNPNIRTVAGIDLNHADIAGYLPDELGLLVDLALFHINSNRFCGTVPHTFNKLKLLFELDLSNNRFAGKFPEVVLNLPALKFLDIRFNEFEGTVPKALFDKDLDAIFINDNRFAFELPDNFGNSPVSVVVLANNKFHGCIPSSIGNMSNLNEINFLNNLFKSCLPSEIGLLKNLTVFDVSFNQLVGSLPSAIGGAVSLEQLNVAHNVFSGKIPASICMLPNLKNFTFSDNFFTGEPAACSALPAVDDKRNCLPARPLQRSPGECAPVLSKPVDCKSFKCKPFDPSLPSPSPVVSPITPQPPAVSPISPSPPGVSPSPPSPPAVSPSLPPPVTVTPISPSPPEVAPSSPPPSTGTPVTPSPPGGEPSSPPPSTGTPISPAPPIVSPSSPPAHSPPHVYSPPPSPTTPVVSPPSHTTPVPPSPPLNTPPSPDPHYGSSPPPTHSPPSWPPHSPVFSPPPVTTPSSPPSPVVPPFFPPPTHSSPPVFLPPPPADPHYGQSPPPSHPPHSPGPHPSPSPPCKEHPAPPPPPSSSSTPPPPVYVSPHPPFQYSPPSPPHPSPVHYSSPPPPPPHVHYSSPPPPALWSPPPPTPAYGGPLPPIVGLPYASPPPPPYY 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05773 695 PRINTS Proline rich extensin signature 392 404 - -
Trre7g05773 695 PRINTS Proline rich extensin signature 413 434 - -
Trre7g05773 695 PRINTS Proline rich extensin signature 438 454 - -
Trre7g05773 695 PRINTS Proline rich extensin signature 368 384 - -
Trre7g05773 695 Pfam Leucine rich repeat 118 173 IPR001611 GO:0005515
Trre7g05773 695 Pfam Leucine rich repeat N-terminal domain 46 80 IPR013210 -
Trre7g05773 695 Gene3D Ribonuclease Inhibitor 211 336 IPR032675 -
Trre7g05773 695 Gene3D Ribonuclease Inhibitor 44 210 IPR032675 -
Trre7g05773 695 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 29 566 - -
Trre7g05773 695 MobiDBLite consensus disorder prediction 370 683 - -
Trre7g05773 695 FunFam Leucine-rich repeat extensin-like protein 1 46 207 - -
Trre7g05773 695 SUPERFAMILY L domain-like 44 327 - -
Trre7g05773 695 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 225 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05773 Trre-Chr7 62702411 62704717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05773 1 363 Trihelix Transcription Factor Family AT4G18670 69.192 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05773 - - cam:101504763 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05773 7 62702411 62704717 Trre7g05773 7 62702411 62704717 ECH