Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05744 ATGGGTGAAGGTGAAAGTAGTGATATTACTCCTAAAAACGCACCATTGGATTCCGTTACTAATTCTACCTCGAAGAAGCTTGCTAGGCAGCTCGATTTCAACGCTTTTGGTGGTGCGCCGGTAACTGCACCTTTGCCGGAACAGCCGCAACCATCTCCGGCACTGCCTCCTCTTCCTGCAGCCAAATTGGGGAAACCAGAATCTCCAAAATCAAAAGCAAGATCTAATTTTGAAACAAAAGATGCTACTCCAAAGAAGCAAAAGCAGTGCAACTGTAAACATTCAAAATGCTTAAAGCTGTATTGTGAATGTTTTGCGTCAGGAATATATTGTGATGGTTGCAATTGTGTAAACTGTTTTAACAATGTTGATAATGAAGCGGCTAGACGAGAAGCTGTAGAAGCAACTTTAGAACGCAATCCAAATGCATTTAGGCCTAAAATAGCGAGTAGTCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGGGAAGTTCTAATATTGGGAAAGCACAATAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGTTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAAGGAAGTGAAGAGCGACAGGCTCTGTTCCATGGAGATCAAAACAACAATATGGCATATATTCAGCAGGCGGCCAATGCTGCCATCACTGGAGCTATTGGTTCCTCTGGTTATTCATCGCCACCAGTATCGAGAAAAAGAAAAGGTTCGGAACTCTGGTCGTCCATCAAGGATCCATCCGTTAACAAGCTGGGACAACAGGCAAATCCTATTAGAGGTCCTGCAGCACCCTCCTCATCCATGTCTCCTGTCCCAGTTGCTCGTGTTGGACCTGCAACAGTAGGCCCTTCAAAATTTATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTGAAGGAGCTTTGCTCTGTTCTTGTACTAGTATCCGGACAAGCCACTAAAACACTTGCAGACCAGAAAAATTTAAAGGATAAGCTCACAGAAGATCAGACAGAAACTTCTCTTGCTTCTTCAAATCAAGAGCAATTGCCAAATCAAAAGGAAGCTGATGTTGAGAAAGCTATGGCTGATGATTGTTCGAGTGCAAACCAAACTGATAAAACCAGTCCTGAAAATTCCAGTTCAGATGGTGCTGATGTTCCAAAAGCGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTGCCCCCTCTATTGGATCAATGGCCCATGCTTGCAACACATCTTCGCAATTTCCTTATGGACAAGGAGCGACAGAGATCTATGCAGAGCAAGAAAGGATTGTATTGACGAAATTCAGAGATTTTCTTAATAGGGTTATCACTATGGGAGAAATAAATGAAACCAAGTGTTCTTCATTAGCAAGAAGTGAGTTAGAGATTCAAAAGGAGCCGGTCATCAATAGCACAGAAAATGCCAGTACTGATGTGGCACATCAACAGGGACTGGGAGCCACCAGTAATGGTGTTGCCAATGTTGTTGGCAACACCACCACTTCAACATCGTTGGTCCCAAGTAGTCTTATTTCGGAAAATGGAGAAATTAAGCCGAAGGTCGAACAATAG 1668 0.4323 MGEGESSDITPKNAPLDSVTNSTSKKLARQLDFNAFGGAPVTAPLPEQPQPSPALPPLPAAKLGKPESPKSKARSNFETKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSRKRKGSELWSSIKDPSVNKLGQQANPIRGPAAPSSSMSPVPVARVGPATVGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQATKTLADQKNLKDKLTEDQTETSLASSNQEQLPNQKEADVEKAMADDCSSANQTDKTSPENSSSDGADVPKARPMSPGTLALMCDEQDTMFMTAAPSIGSMAHACNTSSQFPYGQGATEIYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELEIQKEPVINSTENASTDVAHQQGLGATSNGVANVVGNTTTSTSLVPSSLISENGEIKPKVEQ 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05744 555 PANTHER TESMIN/TSO1-RELATED 56 480 IPR028307 -
Trre7g05744 555 SMART CXC_2 85 125 IPR033467 -
Trre7g05744 555 SMART CXC_2 170 211 IPR033467 -
Trre7g05744 555 MobiDBLite consensus disorder prediction 267 291 - -
Trre7g05744 555 MobiDBLite consensus disorder prediction 355 369 - -
Trre7g05744 555 MobiDBLite consensus disorder prediction 267 284 - -
Trre7g05744 555 MobiDBLite consensus disorder prediction 382 400 - -
Trre7g05744 555 ProSiteProfiles CRC domain profile. 86 210 IPR005172 -
Trre7g05744 555 MobiDBLite consensus disorder prediction 38 80 - -
Trre7g05744 555 MobiDBLite consensus disorder prediction 346 414 - -
Trre7g05744 555 MobiDBLite consensus disorder prediction 1 23 - -
Trre7g05744 555 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 87 122 IPR005172 -
Trre7g05744 555 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 173 207 IPR005172 -
Trre7g05744 555 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05744 Trre-Chr7 62534200 62539783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05744 66 494 CPP Transcription Factor Family AT4G29000 65.596 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Trre7g05744 TCR 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05744 - - psat:127100492 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05744 7 62534200 62539783 Trre7g05744 7 62534200 62539783 ECH