Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05738 ATGAATAGAGGTGTTAATCTACAAAGCTCACCAGTGCAACAAATTATGATGGCTGGAAACCCTAACAACTGGTGGAACACCATGCGCCCTCCTGCACCTGATCATCATCATCATCACCAACCTTTCTTCTCCACCACCACCACTACTACTACTAGTCCTTCTCCTTCTAATTACTTTGTAACTCCATATCCTACTTCTCTTCCTCTTCCTTCTTGGCATGAAAATAATCAAGATCAACTTCCTGAGTCATGGAGTCACCTACTCATGAGTGGTGGTGTGGTATATGAAGAAGATAAGGAACAAATTATGCTAAGTCAGTCTCTCTCAAATGCTTCTTCTTTGGTTGATCATGTCAAACAAGAAACCTCAGTGAACAACTATGTTTATGGAAATGAAGAATTTCATGGAACAACAAATTCTACTTGGTCTCAAATAGTGTCGGTGCCTTCTTCTTCTTCTAATTCCTCCAAATCTAGCATGTTGGATTTTTCTAACAATAAATTTGATACAAGATCTCCACCATCAGATCCATCTTCTGATCAGTGCAATAGTGGTGCAACTGGTGGGGCATTGAAGAAAGCTAGGGTTCAACCATCTACAAATCAGTCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAACTCGTTTCCCCATTTGGAAAGACTGACACAGCATCTGTCTTATTAGAATCAATTGGTTATATCAGATTCCTTCAGAGTCAAATTGAGGCACTTAGCTTACCATACTTGGGAAATGGATCATTAGGAGTAGGGAACATCAAGAACCAACAACAACAATATGTTCAAGGAGAGAAGAATTGTTTTTTCCCTGAACACCCTGGTCAGCTGCTGAATGAAAACTGTTTGAAGAGAAAGGCACTAGAGCAGGATTGTGAAGAAGAAAAGAAGGACCTGAGGAGTAGAGGATTATGTTTGGTTCCAGTTTCATGCACACTACAAGTTGGAAGTGACAATGGAGCTGATTATTGGAATCCTGCTTTTGGTGGTGGATACCAGTAG 1041 0.4054 MNRGVNLQSSPVQQIMMAGNPNNWWNTMRPPAPDHHHHHQPFFSTTTTTTTSPSPSNYFVTPYPTSLPLPSWHENNQDQLPESWSHLLMSGGVVYEEDKEQIMLSQSLSNASSLVDHVKQETSVNNYVYGNEEFHGTTNSTWSQIVSVPSSSSNSSKSSMLDFSNNKFDTRSPPSDPSSDQCNSGATGGALKKARVQPSTNQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQSQIEALSLPYLGNGSLGVGNIKNQQQQYVQGEKNCFFPEHPGQLLNENCLKRKALEQDCEEEKKDLRSRGLCLVPVSCTLQVGSDNGADYWNPAFGGGYQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05738 346 FunFam transcription factor bHLH68 isoform X1 203 256 - -
Trre7g05738 346 Gene3D - 200 255 IPR036638 GO:0046983
Trre7g05738 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Trre7g05738 346 MobiDBLite consensus disorder prediction 148 186 - -
Trre7g05738 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 206 256 IPR036638 GO:0046983
Trre7g05738 346 CDD bHLH_AtbHLH_like 204 253 IPR045239 -
Trre7g05738 346 MobiDBLite consensus disorder prediction 148 204 - -
Trre7g05738 346 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 81 328 - -
Trre7g05738 346 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05738 Trre-Chr7 62497056 62500692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05738 1 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 39.467 5.28e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05738 - - psat:127105731 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05738 7 62497056 62500692 Trre7g05738 7 62497056 62500692 ECH
Trre7g05738 7 62497056 62500692 Trre11g04730 11 58704733 58708673 PCT