Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05726 ATGGCTACTTCAATTCGACCCACTCTTTCTTCCTTTACCCTTTCACCTCTCTTCAATCGTTCTCCTCGTTTCTCTTTCTCCCATTTTTCCACCGTTCCACAATCCCATAGTTTTGGCTTGAAATTGTTTAGAAAAAATGGAAACTCAACGAGAGTGATGGCATCTGGGAACGTGTCTTCATCAGTCACAACGGCTTCATCAGAAAATTTACTGGAATGGGTCAAACAAGACAAAAGAAGATTACTTCATGTTGTTTATCGTGTTGGGGACATGGATAGAACCATTAAATTTTATACCGAGTGTCTTGGAATGAAGCTACTCAGAAAGCGCGACATACCCGAGGAGAAATATACTAATGCTTTTCTTGGATATGGACCTGAAGACTCACATTTTGTTATTGAACTCACATACAATTATGGAGTTGACAAGTATGACATTGGAACTGCATTTGGCCATTTTGGTATTGCAGTTGACGATATTGCAAAAACAGTGGAACTTATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTGTTGAAGACCCCGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATAGAATTTTACGAGAAGGCTTTTGGTATGGAGCTGCTTCGTACACGGGATAATCCAGAGTCCAAGTATACCATAGCAATGCTGGGATATGGTCCAGAAGATAAATCTGCTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCTGAAGCGATTAAACTATCCACGGGAAAGCTTACTCGGGAACCTGGACCGTTGCCTGGCATCAACACAAAAATTACTGCATGCTTGGATCCCGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG 1029 0.4101 MATSIRPTLSSFTLSPLFNRSPRFSFSHFSTVPQSHSFGLKLFRKNGNSTRVMASGNVSSSVTTASSENLLEWVKQDKRRLLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVDDIAKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPESKYTIAMLGYGPEDKSAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05726 342 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 211 334 IPR029068 -
Trre7g05726 342 ProSitePatterns Glyoxalase I signature 1. 83 104 IPR018146 GO:0004462|GO:0046872
Trre7g05726 342 Gene3D - 51 205 IPR029068 -
Trre7g05726 342 FunFam Lactoylglutathione lyase 77 206 - -
Trre7g05726 342 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 80 204 IPR037523 -
Trre7g05726 342 PANTHER LACTOYLGLUTATHIONE LYASE 59 342 - -
Trre7g05726 342 ProSitePatterns Glyoxalase I signature 1. 213 234 IPR018146 GO:0004462|GO:0046872
Trre7g05726 342 CDD GlxI_Ni 81 202 - -
Trre7g05726 342 NCBIfam lactoylglutathione lyase 80 205 IPR004361 GO:0004462|GO:0046872
Trre7g05726 342 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 81 201 IPR004360 -
Trre7g05726 342 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 213 328 IPR004360 -
Trre7g05726 342 FunFam Lactoylglutathione lyase 207 342 - -
Trre7g05726 342 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 79 209 IPR029068 -
Trre7g05726 342 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 210 334 IPR037523 -
Trre7g05726 342 ProSitePatterns Glyoxalase I signature 2. 147 159 IPR018146 GO:0004462|GO:0046872
Trre7g05726 342 Gene3D - 207 342 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05726 Trre-Chr7 62413248 62417116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05726 213 331 Calmodulin-binding Proteins AT1G08110 28.276 5.68e-10 57.0