Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05710 ATGGAGAACACGCTTAAGCCTTTGAGAGATGGTGAGTCCGTGCTGGATTGTCTCAGCCCAAGATCAAGATCCACCGTCGCTGGAGGTGTTGAGGATGTCTACGGTGAGGATCGTGCCACCGAGGATCAACTCGTCACCCCTTGGACTTTTTCTGTTGCCAGTGGTTACTCTTTGCTGAGAGATCCACAGTACAACAAAGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCACATTATTTGCGCGGACTATTACCTCCTACTGTCAGCTCGCAGCAACTTCAGGAGAAGAAACTTATGCATAACATCCGCCAATACGAGGTTCCTTTGCAAAAGTACACGGCCATGATGGACCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAACTTCTTATTGACCATGTTGAGGAATTGCTCCCAATTGTATATACTCCAGTTGTCGGTGAGGCTTGCCAGAAATATGGTAGCATATTCAAGCGTCCTCAGGGTCTATACATTAGTTTGAAAGAGAAGGGTAAAATTCTTGAGGTTTTGAAAAACTGGCCTGAAAGGAGTATTCAAGTTATTGTTGTAACTGATGGTGAGCGAATTTTGGGACTCGGAGATCTTGGATGCCAGGGGATGGGAATTCCTGTTGGTAAATTGGCTTTGTATACGGCGCTAGGAGGAGTTCGTCCTTCAGCATGTTTACCAGTTACGATTGATGTGGGGACAAATAATGAGAAATTACTGAATGACGAGTTTTACATTGGGCTTAGACAAAAGAGGGCAACTGGGAAGGAATACTATGACCTTCTGCACGAGTTCATGAGTGCAGTGAAGCAAAATTATGGTGAAAAAGTTCTTGTTCAGTTTGAAGATTTTGCAAATCACAATGCTTTTGAGTTGCTTGCTAAATACGGTACCACTCATCTTGTTTTCAATGACGATATACAGGGAACTGCATCTGTTGTTCTAGCTGGAGTTGTAGCTGCCCTGAAGCTCATTGGTGGTACCCTACCTGACCATAAATTCCTCTTCCTTGGTGCTGGAGAAGCAGGAACTGGTATAGCAGAACTAATTGCTCTTGAGATATCAAAACAGACTAAAGCACCTATTGAAGAGAGTCGTAAGCAGATATGGCTGGTTGACTCAAAGGGTTTAATTGTTAGTTCACGTGCGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCACGAACACGAGCCTGTTGGCACTCTCATAGAGGCTGTTAAGGTAATCAAGCCTACAGTTCTGATTGGATCATCAGGAGTGGGGAAAACATTTACAAAGGAAGTAGTTGAGGCTATGGCAGCAAACAATAAAGTTCCTCTCATTTTAGCTCTTTCCAACCCAACCTCACAGTCCGAGTGTACAGCTGAAGAGGCATACACATGGAGCGAGGGTCGTGCAATTTTTGCTAGCGGGAGTCCATTTGATCCTGTTGAATACAAAGGCAAAACTTATTATTCTGGCCAGTCCAACAATGCTTATATCTTCCCGGGTTTTGGTTTGGGTTTAGTAATGTCTGGAGCAATCCGAGTACATGATGATATGCTTCTAGCAGCCTCGGAATCCTTGGCAAACCAAGTTACAGAGGAGAGCTACAAAAAGGGCATGACTTATCCACCTTTCACTGATATCAGAAAAATTTCTGCCAACATAGCTGCAAATGTTGCTGCCAAGGCATATGAACTAGGCTTGGCTACACATCTTCCTCGTCCTGAGAATCTTGTCAAGTATGCTGAGAGTTGCATGTATACTCCTGTATACCGTAACTATAGGTGA 1785 0.4409 MENTLKPLRDGESVLDCLSPRSRSTVAGGVEDVYGEDRATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTVSSQQLQEKKLMHNIRQYEVPLQKYTAMMDLQERNERLFYKLLIDHVEELLPIVYTPVVGEACQKYGSIFKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQKRATGKEYYDLLHEFMSAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLPDHKFLFLGAGEAGTGIAELIALEISKQTKAPIEESRKQIWLVDSKGLIVSSRANSLQHFKKPWAHEHEPVGTLIEAVKVIKPTVLIGSSGVGKTFTKEVVEAMAANNKVPLILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFDPVEYKGKTYYSGQSNNAYIFPGFGLGLVMSGAIRVHDDMLLAASESLANQVTEESYKKGMTYPPFTDIRKISANIAANVAAKAYELGLATHLPRPENLVKYAESCMYTPVYRNYR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05710 594 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 310 593 IPR036291 -
Trre7g05710 594 Pfam Malic enzyme, NAD binding domain 310 562 IPR012302 GO:0051287
Trre7g05710 594 SMART malic_2 119 300 IPR012301 GO:0004471
Trre7g05710 594 FunFam Malic enzyme 53 307 - -
Trre7g05710 594 Pfam Malic enzyme, N-terminal domain 119 299 IPR012301 GO:0004471
Trre7g05710 594 Gene3D - 53 307 IPR037062 GO:0004471
Trre7g05710 594 CDD NAD_bind_1_malic_enz 310 588 - -
Trre7g05710 594 PANTHER MALIC ENZYME-RELATED 22 593 - -
Trre7g05710 594 PRINTS Malic enzyme signature 337 353 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 PRINTS Malic enzyme signature 185 214 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 PRINTS Malic enzyme signature 221 243 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 PRINTS Malic enzyme signature 281 299 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 PRINTS Malic enzyme signature 125 149 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 PRINTS Malic enzyme signature 306 322 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 PRINTS Malic enzyme signature 440 456 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 SMART Malic_M_2 310 563 IPR012302 GO:0051287
Trre7g05710 594 ProSitePatterns Malic enzymes signature. 306 322 IPR015884 GO:0004471
Trre7g05710 594 PIRSF ME 25 594 IPR001891 GO:0004470|GO:0004471
Trre7g05710 594 Gene3D - 308 594 - -
Trre7g05710 594 FunFam Malic enzyme 308 594 - -
Trre7g05710 594 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 31 309 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05710 Trre-Chr7 62287935 62292562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g05710 K00029 - gmx:100782096 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05710 7 62287935 62292562 Trre15g00448 15 3218666 3223109 ECH
Trre7g05710 7 62287935 62292562 Trre11g04701 11 58488741 58493142 ECH
Trre7g05710 7 62287935 62292562 Trre5g05471 5 55333036 55337188 ECH
Trre7g05710 7 62287935 62292562 Trre7g05710 7 62287935 62292562 ECH